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寻找集体系统中的结构。

Searching for structure in collective systems.

机构信息

Department of Biology, University of Pennsylvania, Philadelphia, PA, USA.

, West Hartford, CT, USA.

出版信息

Theory Biosci. 2021 Nov;140(4):361-377. doi: 10.1007/s12064-020-00311-9. Epub 2020 Mar 23.

DOI:10.1007/s12064-020-00311-9
PMID:32206979
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8629805/
Abstract

From fish schools and bird flocks to biofilms and neural networks, collective systems in nature are made up of many mutually influencing individuals that interact locally to produce large-scale coordinated behavior. Although coordination is central to what it means to behave collectively, measures of large-scale coordination in these systems are ad hoc and system specific. The lack of a common quantitative scale makes broad cross-system comparisons difficult. Here we identify a system-independent measure of coordination based on an information-theoretic measure of multivariate dependence and show it can be used in practice to give a new view of even classic, well-studied collective systems. Moreover, we use this measure to derive a novel method for finding the most coordinated components within a system and demonstrate how this can be used in practice to reveal intrasystem organizational structure.

摘要

从鱼群和鸟群到生物膜和神经网络,自然界中的集体系统由许多相互影响的个体组成,这些个体通过局部相互作用产生大规模的协调行为。尽管协调是集体行为的核心,但这些系统中的大规模协调措施是特定于系统的,缺乏通用的定量尺度使得进行广泛的跨系统比较变得困难。在这里,我们基于多元依赖的信息论度量方法,确定了一种独立于系统的协调度量方法,并展示了它如何在实践中被用来对即使是经典的、研究充分的集体系统提供新的见解。此外,我们使用这个度量方法来得出一种新的方法,用于在系统中找到最协调的组件,并展示了如何在实践中使用它来揭示系统内的组织结构。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/79131118ae65/12064_2020_311_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/c0db02ea650d/12064_2020_311_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/f9cd65f44133/12064_2020_311_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/19aab3720648/12064_2020_311_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/ae73f29bb5d2/12064_2020_311_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/7615c98e1d25/12064_2020_311_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/8222d538e131/12064_2020_311_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/156a400dcebc/12064_2020_311_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/4ea7d9e60bee/12064_2020_311_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/79131118ae65/12064_2020_311_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/c0db02ea650d/12064_2020_311_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/f9cd65f44133/12064_2020_311_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/19aab3720648/12064_2020_311_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/ae73f29bb5d2/12064_2020_311_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/7615c98e1d25/12064_2020_311_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/8222d538e131/12064_2020_311_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/156a400dcebc/12064_2020_311_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/4ea7d9e60bee/12064_2020_311_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d614/8629805/79131118ae65/12064_2020_311_Fig9_HTML.jpg

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