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刚性增强了聚合物相分离中的幻数效应。

Rigidity enhances a magic-number effect in polymer phase separation.

机构信息

Department of Physics, Princeton University, Princeton, NJ, 08540, USA.

Department of Molecular Biology, Princeton University, Princeton, NJ, 08540, USA.

出版信息

Nat Commun. 2020 Mar 25;11(1):1561. doi: 10.1038/s41467-020-15395-6.

Abstract

Cells possess non-membrane-bound bodies, many of which are now understood as phase-separated condensates. One class of such condensates is composed of two polymer species, where each consists of repeated binding sites that interact in a one-to-one fashion with the binding sites of the other polymer. Biologically-motivated modeling revealed that phase separation is suppressed by a "magic-number effect" which occurs if the two polymers can form fully-bonded small oligomers by virtue of the number of binding sites in one polymer being an integer multiple of the number of binding sites of the other. Here we use lattice-model simulations and analytical calculations to show that this magic-number effect can be greatly enhanced if one of the polymer species has a rigid shape that allows for multiple distinct bonding conformations. Moreover, if one species is rigid, the effect is robust over a much greater range of relative concentrations of the two species.

摘要

细胞具有非膜结合体,其中许多现在被理解为相分离凝聚物。这类凝聚物之一由两种聚合物组成,其中每种聚合物由重复的结合位点组成,这些结合位点以一对一的方式与另一种聚合物的结合位点相互作用。受生物学启发的建模表明,如果两种聚合物能够通过一种聚合物中的结合位点数量是另一种聚合物中的结合位点数量的整数倍来形成完全键合的小分子寡聚物,那么相分离就会受到“魔术数字效应”的抑制。在这里,我们使用格子模型模拟和分析计算表明,如果其中一种聚合物具有允许多种不同键合构象的刚性形状,则这种魔术数字效应可以大大增强。此外,如果有一种物质是刚性的,那么这种效应在两种物质的相对浓度较大的范围内也是稳健的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d08/7096466/e612248568ea/41467_2020_15395_Fig1_HTML.jpg

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