Department of Chemistry and Chemical Technologies, University of Calabria, 87036 Arcavacata di Rende Italy.
Department of Pharmacy, Health and Nutritional Sciences, University of Calabria, 87036 Arcavacata di Rende Italy.
Molecules. 2020 Mar 25;25(7):1485. doi: 10.3390/molecules25071485.
is a widespread tree in the Mediterranean area, and it is mainly used as rootstock for other citrus. In the present study, a vacuum infiltration centrifugation procedure, followed by solid phase extraction matrix-assisted laser desorption ionization tandem mass spectrometry (SPE MALDI MS/MS) analysis, was adopted to isolate proteins from leaves. The results of mass spectrometry (MS) profiling, combined with the top-down proteomics approach, allowed the identification of 78 proteins. The bioinformatic databases TargetP, SignalP, ChloroP, WallProtDB, and mGOASVM-Loc were used to predict the subcellular localization of the identified proteins. Among 78 identified proteins, 20 were targeted as secretory pathway proteins and 36 were predicted to be in cellular compartments including cytoplasm, nucleus, and cell membrane. The largest subcellular fraction was the secretory pathway, accounting for 25% of total proteins. Gene Ontology (GO) of was used to simplify the functional annotation of the proteins that were identified in the leaves. The Kyoto Encyclopedia of Genes and Genomes (KEGG) showed the enrichment of metabolic pathways including glutathione metabolism and biosynthesis of secondary metabolites, suggesting that the response to a range of environmental factors is the key processes in citrus leaves. Finally, the Lipase GDSL domain-containing protein GDSL esterase/lipase, which is involved in plant development and defense response, was for the first time identified and characterized in .
香柠檬是地中海地区广泛种植的树种,主要用作其他柑橘类作物的砧木。本研究采用真空渗透离心法,结合固相萃取基质辅助激光解吸串联质谱法(SPE MALDI MS/MS)分析,从叶片中分离蛋白质。质谱(MS)分析结果与自上而下的蛋白质组学方法相结合,鉴定出 78 种蛋白质。使用 TargetP、SignalP、ChloroP、WallProtDB 和 mGOASVM-Loc 生物信息学数据库预测鉴定蛋白的亚细胞定位。在鉴定出的 78 种蛋白质中,有 20 种被靶向为分泌途径蛋白,36 种被预测存在于细胞质、细胞核和细胞膜等细胞区室中。最大的亚细胞区室是分泌途径,占总蛋白的 25%。使用基因本体论(GO)简化了叶片中鉴定出的蛋白质的功能注释。京都基因与基因组百科全书(KEGG)显示了代谢途径的富集,包括谷胱甘肽代谢和次生代谢物的生物合成,这表明柑橘叶片对一系列环境因素的反应是关键过程。最后,首次在香柠檬中鉴定并表征了参与植物发育和防御反应的含 GDSL 结构域的脂肪酶 GDSL 酯酶/脂肪酶。