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去泛素化酶在行动:植物生物学中的新兴领域。

De-ubiquitinases on the move: an emerging field in plant biology.

机构信息

Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.

出版信息

Plant Biol (Stuttg). 2020 Jul;22(4):563-572. doi: 10.1111/plb.13118. Epub 2020 Apr 30.

DOI:10.1111/plb.13118
PMID:32233097
Abstract

A balance between the synthesis and degradation of active proteins governs diverse cellular processes in plants, spanning from cell-cycle progression and circadian rhythm to the outcome of several hormone signalling pathways. Ubiquitin-mediated post-translational modification determines the degradative fate of the target proteins, thereby altering the output of cellular processes. An equally important, and perhaps under-appreciated, aspect of this pathway is the antagonistic process of de-ubiquitination. De-ubiquitinases (DUBs), a group of processing enzymes, play an important role in maintaining cellular ubiquitin homeostasis by hydrolyzing ubiquitin poly-proteins and free poly-ubiquitin chains into mono-ubiquitin. Further, DUBs rescue the cellular proteins from 26S proteasome-mediated degradation to their active form by cleaving the poly-ubiquitin chain from the target protein. Any perturbation in DUB activity is likely to affect proteostasis and downstream cellular processes. This review illustrates recent findings on the biological significance and mechanisms of action of the DUBs in Arabidopsis thaliana, with an emphasis on ubiquitin-specific proteases (UBPs), the largest family among the DUBs. We focus on the putative roles of various protein-protein interaction interfaces in DUBs and their generalized function in ubiquitin recycling, along with their pre-eminent role in plant development.

摘要

在植物中,活性蛋白的合成和降解之间的平衡控制着多种细胞过程,从细胞周期进程和昼夜节律到几种激素信号通路的结果。泛素介导的翻译后修饰决定了靶蛋白的降解命运,从而改变了细胞过程的输出。这条途径同样重要,甚至可能被低估的一个方面是去泛素化的拮抗过程。去泛素化酶(DUBs)是一组加工酶,通过将泛素多聚体和游离多聚泛素链水解成单泛素,在维持细胞泛素稳态方面发挥着重要作用。此外,DUBs 通过从靶蛋白上切割多泛素链,将细胞蛋白从 26S 蛋白酶体介导的降解中拯救出来,使其恢复到活性形式。DUB 活性的任何扰动都可能影响蛋白质稳态和下游细胞过程。本文综述了 DUB 在拟南芥中的生物学意义和作用机制的最新发现,重点介绍了 DUB 中最大的家族——泛素特异性蛋白酶(UBP)。我们专注于 DUB 中各种蛋白-蛋白相互作用界面的假设作用及其在泛素回收中的普遍功能,以及它们在植物发育中的突出作用。

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引用本文的文献

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Plant Cell. 2024 Sep 3;36(9):3057-3073. doi: 10.1093/plcell/koae129.
2
A dynamic ubiquitination balance of cell proliferation and endoreduplication regulators determines plant organ size.细胞增殖和内复制调节因子的动态泛素化平衡决定了植物器官的大小。
Sci Adv. 2024 Mar 15;10(11):eadj2570. doi: 10.1126/sciadv.adj2570. Epub 2024 Mar 13.
3
The Arabidopsis Deubiquitylase OTU5 Suppresses Flowering by Histone Modification-Mediated Activation of the Major Flowering Repressors , , and .
拟南芥去泛素化酶 OTU5 通过组蛋白修饰介导的主要开花抑制因子的激活来抑制开花,, 和.
Int J Mol Sci. 2023 Mar 24;24(7):6176. doi: 10.3390/ijms24076176.
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Lipid-mediated activation of plasma membrane-localized deubiquitylating enzymes modulate endosomal trafficking.脂质介导线粒体膜定位去泛素化酶的激活调节内体运输。
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Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains.在绿色植物 OTUB 亚家族中保守的 Met1 特异性基序使水稻 OTUB1 能够水解 Met1 泛素链。
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