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鉴定10种差异表达的长链非编码RNA作为前列腺腺癌的预后生物标志物。

Identification of 10 differently expressed lncRNAs as prognostic biomarkers for prostate adenocarcinoma.

作者信息

Wu Zi Yu, Wang Su Gui, Li Qiang, Zhao Qing Song, Shao Ming Ming

机构信息

Department of Urology, Huai'an Hospital Affiliated of Xuzhou Medical University, 62 South Huaihai Road, Huai'an 223002, China.

Department of Urology, Jining NO.1 People's hospital, 6 Jiankang Road, Jining 272000, China.

出版信息

Math Biosci Eng. 2019 Dec 24;17(3):2037-2047. doi: 10.3934/mbe.2020108.

DOI:10.3934/mbe.2020108
PMID:32233522
Abstract

Prostate adenocarcinoma (PRAD) is one of the most frequently diagnosed cancer in males. Previous studies had demonstrated long non-coding RNAs (lncRNAs) played crucial roles in human cancers. In present study, we reported ten disease-free survival time related lncRNAs in PRAD, including RP11-468E2.5, GS1-393G12.13, CTD-2228K2.7, RP11-783K16.13, RP11-631N16.4, CTC-435M10.12, RP11-1109F11.5, RP11-228B15.4, RP11-496I9.1, and RP11-95O2.5. Higher expression of these lncRNAs significantly correlates to shorter DFS time in patients with PRAD. We next constructed lncRNAs regulating PPI networks in PRAD. Bioinformatics analysis revealed these DFS-related lncRNAs were associated with the regulation of cell cycle, glucose metabolic process, histone modification, and RNA splicing. AR and SPOP were identified to be involved in regulating these lncRNAs expression in PRAD. The prognostic value and molecular functions of these lnRNAs in human diseases remained largely unknown. We thought this study for the first time demonstrated that they could act as novel potential biomarkers for PRAD.

摘要

前列腺腺癌(PRAD)是男性中最常被诊断出的癌症之一。先前的研究表明,长链非编码RNA(lncRNAs)在人类癌症中起着关键作用。在本研究中,我们报告了PRAD中与无病生存时间相关的10种lncRNAs,包括RP11-468E2.5、GS1-393G12.13、CTD-2228K2.7、RP11-783K16.13、RP11-631N16.4、CTC-435M10.12、RP11-1109F11.5、RP11-228B15.4、RP11-496I9.1和RP11-95O2.5。这些lncRNAs的高表达与PRAD患者较短的无病生存期显著相关。接下来,我们构建了PRAD中lncRNAs调控的蛋白质-蛋白质相互作用(PPI)网络。生物信息学分析显示,这些与无病生存期相关的lncRNAs与细胞周期调控、葡萄糖代谢过程、组蛋白修饰和RNA剪接有关。雄激素受体(AR)和SPOP被确定参与调控PRAD中这些lncRNAs的表达。这些lncRNAs在人类疾病中的预后价值和分子功能在很大程度上仍然未知。我们认为这项研究首次证明它们可以作为PRAD新的潜在生物标志物。

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引用本文的文献

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Cells. 2021 Nov 16;10(11):3198. doi: 10.3390/cells10113198.
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Four long noncoding RNAs act as biomarkers in lung adenocarcinoma.四种长链非编码RNA在肺腺癌中作为生物标志物发挥作用。
Open Med (Wars). 2021 Apr 21;16(1):660-671. doi: 10.1515/med-2021-0276. eCollection 2021.
3
LncRNA CDKN2B-AS1 Promotes Cell Viability, Migration, and Invasion of Hepatocellular Carcinoma via Sponging miR-424-5p.
长链非编码RNA CDKN2B-AS1通过海绵化miR-424-5p促进肝细胞癌的细胞活力、迁移和侵袭。
Cancer Manag Res. 2020 Aug 4;12:6807-6819. doi: 10.2147/CMAR.S240000. eCollection 2020.