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一种具有信号灯功能的酶:乙酸盐结合可使亚氯酸盐歧化酶从红色血红素蛋白可逆地转变为绿色血红素蛋白。

A traffic light enzyme: acetate binding reversibly switches chlorite dismutase from a red- to a green-colored heme protein.

作者信息

Mahor Durga, Püschmann Julia, van den Haak Menno, Kooij Pepijn J, van den Ouden David L J, Strampraad Marc J F, Srour Batoul, Hagedoorn Peter-Leon

机构信息

Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629HZ, Delft, The Netherlands.

Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France.

出版信息

J Biol Inorg Chem. 2020 Jun;25(4):609-620. doi: 10.1007/s00775-020-01784-1. Epub 2020 Apr 3.

DOI:10.1007/s00775-020-01784-1
PMID:32246282
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7239840/
Abstract

Chlorite dismutase is a unique heme enzyme that catalyzes the conversion of chlorite to chloride and molecular oxygen. The enzyme is highly specific for chlorite but has been known to bind several anionic and neutral ligands to the heme iron. In a pH study, the enzyme changed color from red to green in acetate buffer pH 5.0. The cause of this color change was uncovered using UV-visible and EPR spectroscopy. Chlorite dismutase in the presence of acetate showed a change of the UV-visible spectrum: a redshift and hyperchromicity of the Soret band from 391 to 404 nm and a blueshift of the charge transfer band CT1 from 647 to 626 nm. Equilibrium binding titrations with acetate resulted in a dissociation constant of circa 20 mM at pH 5.0 and 5.8. EPR spectroscopy showed that the acetate bound form of the enzyme remained high spin S = 5/2, however with an apparent change of the rhombicity and line broadening of the spectrum. Mutagenesis of the proximal arginine Arg183 to alanine resulted in the loss of the ability to bind acetate. Acetate was discovered as a novel ligand to chlorite dismutase, with evidence of direct binding to the heme iron. The green color is caused by a blueshift of the CT1 band that is characteristic of the high spin ferric state of the enzyme. Any weak field ligand that binds directly to the heme center may show the red to green color change, as was indeed the case for fluoride.

摘要

亚氯酸盐歧化酶是一种独特的血红素酶,可催化亚氯酸盐转化为氯离子和分子氧。该酶对亚氯酸盐具有高度特异性,但已知它能与血红素铁结合多种阴离子和中性配体。在一项pH研究中,该酶在pH 5.0的醋酸盐缓冲液中颜色从红色变为绿色。利用紫外可见光谱和电子顺磁共振光谱揭示了这种颜色变化的原因。在醋酸盐存在下,亚氯酸盐歧化酶的紫外可见光谱发生了变化:Soret带从391 nm红移并增色至404 nm,电荷转移带CT1从647 nm蓝移至626 nm。用醋酸盐进行的平衡结合滴定在pH 5.0和5.8时得到的解离常数约为20 mM。电子顺磁共振光谱表明,酶的醋酸盐结合形式仍保持高自旋S = 5/2,然而光谱的菱形度和线宽有明显变化。将近端精氨酸Arg183突变为丙氨酸导致失去结合醋酸盐的能力。醋酸盐被发现是亚氯酸盐歧化酶的一种新型配体,有证据表明其直接与血红素铁结合。绿色是由CT1带蓝移引起的,这是该酶高自旋铁状态的特征。任何直接与血红素中心结合的弱场配体都可能呈现从红色到绿色的颜色变化,氟化物的情况确实如此。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/a2abe13d76c9/775_2020_1784_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/5f7ec04e2bb2/775_2020_1784_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/37b8b6153dc3/775_2020_1784_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/f42626d4ae03/775_2020_1784_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/8363005bc981/775_2020_1784_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/a2abe13d76c9/775_2020_1784_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/5f7ec04e2bb2/775_2020_1784_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/37b8b6153dc3/775_2020_1784_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/f42626d4ae03/775_2020_1784_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/8363005bc981/775_2020_1784_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7998/7239840/a2abe13d76c9/775_2020_1784_Fig5_HTML.jpg

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Biochemistry. 2018 Mar 6;57(9):1501-1516. doi: 10.1021/acs.biochem.7b01278. Epub 2018 Feb 16.
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Active Sites of O-Evolving Chlorite Dismutases Probed by Halides and Hydroxides and New Iron-Ligand Vibrational Correlations.通过卤化物和氢氧化物以及新的铁-配体振动相关性探究放氧亚氯酸盐歧化酶的活性位点
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From chlorite dismutase towards HemQ - the role of the proximal H-bonding network in haeme binding.
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Structure and heme-binding properties of HemQ (chlorite dismutase-like protein) from Listeria monocytogenes.来自单核细胞增生李斯特菌的HemQ(亚氯酸盐歧化酶样蛋白)的结构与血红素结合特性
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