Institute of Environmental Systems Biology, College of Environmental Science and Engineering, Dalian Maritime University, Dalian, Liaoning, Linghai Road 1, 116026, China.
Biomed Res Int. 2020 Mar 13;2020:8962635. doi: 10.1155/2020/8962635. eCollection 2020.
Long noncoding RNAs (lncRNAs) are a class of noncoding RNAs that modulate gene expression, thereby participating in the regulation of various cellular processes. However, it is not clear about the expression and underlying mechanism of lncRNAs in irradiation-induced DNA damage response. In the present study, we performed integrative analysis of lncRNA-mRNA expression profile in human lymphocytes irradiated with ultraviolet-C (UVC). The results showed that exposure to UVC irradiation dose-dependently increased the fluorescence intensity of -HAX and induced cell death. Microarray analysis revealed that up-regulated lncRNAs were more common than down-regulated lncRNAs with the increase of radiation dose in UVC-radiated cells. Stem analysis demonstrated the relationship between lncRNA expression level and radiation dose. qPCR results confirmed that LOC338799 and its coexpressed genes such as LCE1F and ISCU showed the increase in expression levels with the increase of UVC radiation dose. We utilized Cytoscape to screen out 5 lncRNAs and 13 coexpressed genes linking to p53, which might participate in the regulation of DNA damage, cell cycle arrest, apoptosis, and cell death. These findings suggest that lncRNAs might play a role in UVC-induced DNA damage response through regulating expression of genes in p53 signaling pathway.
长链非编码 RNA(lncRNA)是一类非编码 RNA,可调节基因表达,从而参与各种细胞过程的调控。然而,lncRNA 在辐射诱导的 DNA 损伤反应中的表达及其潜在机制尚不清楚。在本研究中,我们对经紫外线-C(UVC)照射的人淋巴细胞中的 lncRNA-mRNA 表达谱进行了综合分析。结果表明,UVC 照射剂量依赖性地增加了-HAX 的荧光强度并诱导细胞死亡。微阵列分析显示,与辐射剂量增加相关的上调 lncRNA 比下调 lncRNA 更为常见。干细胞分析表明 lncRNA 表达水平与辐射剂量之间存在关系。qPCR 结果证实,LOC338799 及其共表达基因(如 LCE1F 和 ISCU)的表达水平随 UVC 辐射剂量的增加而增加。我们利用 Cytoscape 筛选出与 p53 相关的 5 个 lncRNA 和 13 个共表达基因,它们可能参与 DNA 损伤、细胞周期阻滞、细胞凋亡和细胞死亡的调控。这些发现表明,lncRNA 可能通过调节 p53 信号通路中的基因表达,在 UVC 诱导的 DNA 损伤反应中发挥作用。