Servicio de Microbiología, Hospital Universitario Ramón y Cajal and Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS), Madrid, Spain.
Spanish Network for Research in Infectious Diseases (REIPI), Instituto de Salud Carlos III, Madrid, Spain.
mSphere. 2020 Apr 8;5(2):e00080-20. doi: 10.1128/mSphere.00080-20.
Carbapenemase-producing (CPE) have become an important public health concern. In our hospital, VIM enzymes were first detected in 2005, carbapenemase (KPC) enzymes in 2009, and OXA-48 enzymes in 2012. We assess the population biology of the first OXA-48-producing isolates recovered in our hospital (2012 to 2013) where infections by other carbapenemases had been endemic for several years. Over a 21-month period, 71 isolates (61 , 5 , 2 , and 1 each of , , and ) recovered from clinical and surveillance specimens from 57 patients (22.8% nonhospitalized) were investigated for OXA-48-like-producing enzymes. Analyses for characterization and determination of the location of the gene, plasmid transferability, sequence, and clonal relatedness were performed. Most of the isolates also coproduced CTX-M-15 (57/71, 80.3%) and/or VIM-1 (7/71, 9.8%). was predominantly identified as sequence type 11 (ST11) (63.4%) and ST405 (9.8%) and as ST540, ST1406, ST3163, and ST4301. The gene was part of Tn located at the gene of plasmids (ca. ≥50 kb) of the IncL/M group, also carrying and genes. We selected one ST11 isolate for whole-genome sequencing in which we studied the plasmid containing the gene. This plasmid was compared with indexed plasmids existing in NCBI database by the use of BRIG and MAUVE. Our data suggest a rapid spread of genes between commonly isolated high-risk clones of species, frequently associated with antibiotic resistance. Moreover, the emergence of the multiresistant ST11 clone among nonhospitalized patients emphasizes the difficulty of preventing its dissemination into the community. We present results of microbiological analysis of the first isolates that were isolated in 2012 in our institution expressing OXA-48 carbapenemase. This enzyme confers resistance to carbapenems, an important group of antibiotics widely used in the hospitals. OXA-48 carbapenemase is currently present in many parts of the world, but it is found particularly frequently in the Mediterranean area. It was disseminated at the Ramón y Cajal Hospital and found to be associated with a particular strain, so-called high-risk clone ST11, which was previously found in our institution in association with other enzymes such as CTX-M-15, VIM-1, and KPC-3. This clone might have acquired a plasmid harboring the gene. Our results point out the importance of local epidemiology in the dissemination and maintenance of multidrug-resistant bacteria.
产碳青霉烯酶(CPE)已成为一个重要的公共卫生关注点。在我们医院,2005 年首次检测到 VIM 酶,2009 年检测到碳青霉烯酶(KPC),2012 年检测到 OXA-48 酶。我们评估了 2012 年至 2013 年期间首次在我院分离的产 OXA-48 酶的分离株的种群生物学特征,在此之前,其他碳青霉烯酶的感染已在我院流行多年。在 21 个月的时间里,对来自 57 名患者(22.8%为非住院患者)的临床和监测标本中分离的 71 株(61 株、5 株、2 株和 1 株分别为、和)进行了产 OXA-48 样酶的检测。对 基因的特征分析、定位、质粒可转移性、序列和克隆相关性进行了分析。大多数分离株还同时产生 CTX-M-15(57/71,80.3%)和/或 VIM-1(7/71,9.8%)。 主要鉴定为 11 型序列(ST11)(63.4%)和 ST405(9.8%)和 ST540,ST1406,ST3163 和 ST4301。 基因位于 Tn 基因上,位于 IncL/M 组质粒(约≥50kb)的 基因内,还携带 基因和 基因。我们选择了一株 ST11 分离株进行全基因组测序,在该研究中我们研究了携带 基因的质粒。通过使用 BRIG 和 MAUVE,将该质粒与 NCBI 数据库中存在的索引质粒进行了比较。我们的数据表明, 基因在 种的常见高风险克隆之间迅速传播,这些克隆通常与抗生素耐药性有关。此外,耐多药 ST11 克隆在非住院患者中的出现强调了预防其在社区中传播的困难。我们介绍了 2012 年在我院首次分离表达 OXA-48 碳青霉烯酶的 分离株的微生物学分析结果。这种酶对碳青霉烯类抗生素具有耐药性,而碳青霉烯类抗生素是广泛应用于医院的一类重要抗生素。OXA-48 碳青霉烯酶目前在世界许多地区都有发现,但在地中海地区尤为常见。它在拉蒙·卡哈尔医院传播,并与一种所谓的高风险克隆 ST11 有关,该克隆之前在我院与其他酶如 CTX-M-15、VIM-1 和 KPC-3 有关。该克隆可能获得了携带 基因的质粒。我们的结果指出了局部流行病学在传播和维持多药耐药细菌方面的重要性。