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巴西牛源大肠埃希氏菌中携带扩展谱β-内酰胺酶(ESBL)bla 基因的 IncI1/pST113 质粒的流行传播。

Epidemic spread of IncI1/pST113 plasmid carrying the Extended-Spectrum Beta-Lactamase (ESBL) bla gene in Escherichia coli of Brazilian cattle.

机构信息

Microbiology - Biological Sciences Department, Faculty of Pharmacy, University of Porto, Porto, Portugal; UCIBIO - Research Unit on Applied Molecular Biosciences, REQUIMTE, Portugal.

Unité Antibiorésistance et Virulence Bactériennes, Université de Lyon - Anses Laboratoire de Lyon, France.

出版信息

Vet Microbiol. 2020 Apr;243:108629. doi: 10.1016/j.vetmic.2020.108629. Epub 2020 Feb 26.

Abstract

INTRODUCTION

The prevalence of Extended-Spectrum Beta-Lactamase (ESBL)-producing Enterobacteriaceae is increasing worldwide and the Agri-Food sector acts as a reservoir of clinically relevant ESBL genes. Our study aimed at detecting and characterizing ESBL-producing Enterobacteriaceae responsible for intestinal colonization of Brazilian bovines.

MATERIAL AND METHODS

ESBL-producing E. coli isolates were recovered from fecal samples of healthy cattle in Northwest Brazil. Antimicrobial susceptibility was determined by disk diffusion. Resistance and virulence genes were identified by PCR and amplicons were sequenced, clonality was assessed by PFGE and MLST, and plasmids were characterized by replicon typing, S1-PFGE and Southern blot hybridizations. Transferability of ESBL genes was assessed by conjugation assay.

RESULTS

A total of 40 ESBL-producing E. coli were characterized, which originated from 34/191 animals (17.8 %) and 15/22 farms (68.2 %). The bla gene was the most frequent ESBL gene (62.5 %), followed by bla (20.0 %), bla (10.0 %), and bla (7.5 %). The bla gene was localized on the IncI1/pST113 plasmid in multiple E. coli sequence types across unrelated animals and farms.

DISCUSSION

We report the first characterization and a high prevalence of ESBL-producing E. coli in the beef cattle sector in Brazil, which is mainly supported by the spread of an epidemic IncI1/pST113/bla plasmid. Since Brazil is one of the biggest beef meat exporters worldwide, the spread of this ESBL plasmid across other sectors, countries and continents should be considered with attention.

摘要

简介

全球范围内,产生扩展谱β-内酰胺酶(ESBL)的肠杆菌科的流行率正在上升,农业食品部门是临床相关 ESBL 基因的储存库。我们的研究旨在检测和鉴定导致巴西牛肠道定植的产 ESBL 肠杆菌科。

材料和方法

从巴西西北部健康牛的粪便样本中回收产 ESBL 的大肠杆菌分离株。通过圆盘扩散法测定抗生素敏感性。通过 PCR 鉴定耐药和毒力基因,对扩增子进行测序,通过 PFGE 和 MLST 评估克隆性,通过复制子分型、S1-PFGE 和 Southern blot 杂交分析质粒,通过接合试验评估 ESBL 基因的可转移性。

结果

共鉴定了 40 株产 ESBL 的大肠杆菌,源自 34/191 只动物(17.8%)和 15/22 个农场(68.2%)。bla 基因是最常见的 ESBL 基因(62.5%),其次是 blaCTX-M-15(20.0%)、blaCTX-M-27(10.0%)和 blaCTX-M-14(7.5%)。bla 基因位于 IncI1/pST113 质粒上,在不同动物和农场的多个大肠杆菌序列型中发现。

讨论

我们报告了巴西牛肉部门中首次发现产 ESBL 的大肠杆菌的特征和高流行率,这主要得益于流行的 IncI1/pST113/bla 质粒的传播。由于巴西是全球最大的牛肉出口国之一,因此应该注意到这种 ESBL 质粒在其他部门、国家和大洲的传播。

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