Guangxi Collaborative Innovation Center for Biomedicine, Guangxi Medical University, Nanning 530021, PR China.
Spine and Osteopathy Ward, The First Affiliated Hospital of Guangxi Medical University, Nanning 530021, PR China.
Epigenomics. 2020 Jul;12(13):1095-1108. doi: 10.2217/epi-2020-0079. Epub 2020 Apr 14.
To identify a key competitive endogenous RNA network for intervertebral disc degeneration. Based on circular RNA, microRNA and mRNA expression profiles of nucleus pulposus cells, a variety of bioinformatics methods were used to screen key molecular structures and construct competitive endogenous RNA networks. 190 upregulated genes and 77 downregulated genes were identified. Gene ontology/Kyoto Encyclopedia of Genes and Genomes functional analysis showed that autophagy was out of balance with apoptosis. Nine hub genes, five hub microRNAs and eight hub circular RNAs were obtained through progressive reverse prediction and verification. We believe that disc degeneration is caused by an imbalance between autophagy and apoptosis in nucleus pulposus cells, which may provide nonsurgical treatment for the future delay or prevention of spinal degenerative diseases associated with intervertebral disc degeneration.
为了鉴定椎间盘退变的关键竞争性内源性 RNA 网络。基于核髓细胞的环状 RNA、microRNA 和 mRNA 表达谱,采用多种生物信息学方法筛选关键分子结构并构建竞争性内源性 RNA 网络。鉴定出 190 个上调基因和 77 个下调基因。基因本体论/京都基因与基因组百科全书功能分析表明自噬与细胞凋亡失衡。通过逐步反向预测和验证,获得了 9 个枢纽基因、5 个枢纽 microRNA 和 8 个枢纽环状 RNA。我们认为椎间盘退变是由核髓细胞中自噬与细胞凋亡失衡引起的,这可能为未来延缓或预防与椎间盘退变相关的脊柱退行性疾病提供非手术治疗。