Pairas George N, Tsoungas Petros G
Department of Pharmacy Laboratory of Medicinal Chemistry University of Patras GR-265 04 Patras Greece.
Laboratory of Biochemistry Hellenic Pasteur Institute 127 Vas. Sofias Ave. GR-115 21 Athens Greece.
ChemistrySelect. 2016 Sep 16;1(15):4520-4532. doi: 10.1002/slct.201600770. Epub 2016 Sep 20.
H-bonding, as a non covalent stabilizing interaction of diverse nature, has a central role in the structure, function and dynamics of chemical and biological processes, pivotal to molecular recognition and eventually to drug design. Types of conventional and non conventional (H-H, dihydrogen, H- π, CH- π, anti- , proton coordination and H-S) H-bonding interactions are discussed as well as features emerging from their interplay, such as cooperativity (σ- and π-) effects and allostery. Its utility in many applications is described. Catalysis, proton and electron transfer processes in various materials or supramolecular architectures of preorganized hosts for guest binding, are front-line technology. The H-bond-related concept of proton transfer (PT) addresses energy issues or deciphering the mechanism of many natural and synthetic processes. PT is also of paramount importance in the functions of cells and is assisted by large complex proteins embedded in membranes. Both intermolecular and intramolecular PT in H-bonded systems has received attention, theoretically and experimentally, using prototype molecules. It is found in rearrangement reactions, protein functions, and enzyme reactions or across proton channels and pumps. Investigations on the competition between intra- and intermolecular H bonding are discussed. Of particular interest is the H-bond furcation, a common phenomenon in protein-ligand binding. Multiple H-bonding (H-bond furcation) is observed in supramolecular structures.
氢键作为一种具有多种性质的非共价稳定相互作用,在化学和生物过程的结构、功能及动力学中起着核心作用,对分子识别乃至药物设计至关重要。文中讨论了传统和非传统(H-H、双氢键、H-π、CH-π、反氢键、质子配位和H-S)氢键相互作用的类型,以及它们相互作用产生的特征,如协同(σ-和π-)效应和变构效应。描述了其在许多应用中的效用。催化、各种材料中的质子和电子转移过程,或用于客体结合的预组织主体的超分子结构,都是前沿技术。与氢键相关的质子转移(PT)概念涉及能量问题或解读许多自然和合成过程的机制。PT在细胞功能中也至关重要,并且由嵌入膜中的大型复杂蛋白质协助进行。在理论和实验上,使用原型分子对氢键体系中的分子间和分子内PT都进行了研究。它存在于重排反应、蛋白质功能、酶反应中,或跨越质子通道和泵。文中讨论了分子内和分子间氢键竞争的研究。特别令人感兴趣的是氢键分叉,这是蛋白质-配体结合中的常见现象。在超分子结构中观察到了多重氢键(氢键分叉)。