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依赖于重复的生物样本,以减少将暴露组与健康相关联的研究中经典型暴露测量误差的影响。

Relying on repeated biospecimens to reduce the effects of classical-type exposure measurement error in studies linking the exposome to health.

机构信息

Team of Environmental Epidemiology Applied to Reproduction and Respiratory Health, Inserm, CNRS, University Grenoble Alpes, Institute for Advanced Biosciences (IAB), U1209 Joint Research Center, Grenoble, France.

ISGlobal, Barcelona, Spain; Universitat Pompeu Fabra (UPF), Barcelona, Spain; CIBER Epidemiología y Salud Pública (CIBERESP), Spain.

出版信息

Environ Res. 2020 Jul;186:109492. doi: 10.1016/j.envres.2020.109492. Epub 2020 Apr 9.

Abstract

The exposome calls for assessing numerous exposures, typically using biomarkers with varying amounts of measurement error, which can be assumed to be of classical type. We evaluated the impact of classical-type measurement error on the performance of exposome-health studies, and the efficiency of two measurement error correction methods relying on the collection of repeated biospecimens: within-subject biospecimens pooling and regression calibration. In a simulation study, we generated 237 exposures from a realistic correlation matrix, with various amounts of classical-type measurement error, and a continuous health outcome linearly influenced by exposures. Measurement error decreased the sensitivity to identify exposures influencing health from a value of 75% down to 46%, increased false discovery proportion from 26% to 49% and increased attenuation bias in the slope of true predictors from 45% to 66%. Assuming that repeated biospecimens were available, within-subject pooling and regression calibration improved sensitivity (which increased to 63%), false discovery proportion (down to 37%) and bias (down to 49%) compared to an error-prone study with a single biospecimen per subject. Performances were poorer for the exposures with the largest amount of measurement error, and increased with the number of available biospecimens. Relying on repeated biospecimens only for the exposures with the largest amount of measurement error provided similar performance improvement. Exposome studies relying on spot exposure biospecimens suffer from decreased performances if some biomarkers suffer from measurement error due to their temporal variability; performances can be improved by collecting repeated biospecimens per subject, in particular for non persistent chemicals.

摘要

暴露组学需要评估大量的暴露因素,通常使用具有不同测量误差量的生物标志物,这些误差可以假定为经典类型。我们评估了经典型测量误差对暴露组学-健康研究性能的影响,以及两种依赖于重复生物样本收集的测量误差校正方法的效率:个体内生物样本混合和回归校正。在一项模拟研究中,我们从具有不同经典型测量误差量的现实相关矩阵中生成了 237 个暴露因素,并具有线性受暴露因素影响的连续健康结果。测量误差使识别影响健康的暴露因素的敏感性从 75%降低到 46%,假发现率从 26%增加到 49%,真实预测因子斜率的衰减偏差从 45%增加到 66%。假设可以获得重复的生物样本,与每个个体只有一个生物样本的易出错研究相比,个体内混合和回归校正提高了敏感性(增加到 63%)、假发现率(降低到 37%)和偏差(降低到 49%)。对于具有最大测量误差的暴露因素,性能较差,并且随着可用生物样本数量的增加而增加。仅依赖于具有最大测量误差的暴露因素的重复生物样本,提供了类似的性能改进。如果由于时间变异性而使某些生物标志物存在测量误差,那么依赖于点暴露生物样本的暴露组学研究的性能会下降;通过收集每个个体的重复生物样本,可以提高性能,特别是对于非持久性化学物质。

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