• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

孤立的逐步溶剂化肽的氧 K 壳层光谱。

Oxygen K-shell spectroscopy of isolated progressively solvated peptide.

机构信息

SOLEIL, l'Orme des Merisiers, St Aubin, BP48, 91192 Gif sur Yvette Cedex, France.

出版信息

Phys Chem Chem Phys. 2020 Jun 21;22(23):12909-12917. doi: 10.1039/d0cp00994f. Epub 2020 Apr 29.

DOI:10.1039/d0cp00994f
PMID:32347253
Abstract

Gas-phase near-edge X-ray-absorption fine structure (NEXAFS) action spectroscopy around the oxygen K-edge and mass spectrometry were employed to probe isolated substance P (SP) molecular ions, both bare and progressively solvated with 4 and 11 water molecules. Detailed mass spectra of bare and hydrated precursors are presented for the resonant photon energy of 532 eV that corresponds to O1s →π* core excitation, triggering resonant Auger decay and fragmentation from the ionized radical molecular system. The fragmentation pattern of doubly protonated SP hydrated with 4 water molecules clearly shows a series of abundant doubly charged backbone fragments, as well as triply charged precursor with small neutral losses, all preserving full water cluster. This is drastically different from the collisional induced dissociation of the hydrated peptide where the water loss is a dominant relaxation process. Moreover, the action NEXAFS obtained from several resolved small backbone fragments revealed increased fragmentation of hydrated SP relative to the bare one, due to a resonant O1s excitation of the attached water molecules. Such unexpected result inspires further experimental developments to investigate possible nonlocal energy transfer from the solvent to the biomolecules within the first solvation shell. The experiment is supported by molecular dynamics and DFT calculations to estimate the intensity of the resonant X-ray absorption of bare and hydrated SP around peptide and water O1s excitation region.

摘要

采用气相近边 X 射线吸收精细结构(NEXAFS)作用光谱和质谱研究了分离的 P 物质(SP)分子离子,包括裸露的和逐步溶剂化的 4 个和 11 个水分子。给出了对应于 O1s→π* 核心激发,引发共振俄歇衰变和从离子化自由基分子体系中碎裂的共振光子能量为 532eV 的裸露和水合前体的详细质谱。与 4 个水分子水合的二质子化 SP 的碎片模式清楚地显示了一系列丰富的双电荷骨架碎片,以及具有小中性损失的三电荷前体,所有碎片都保留了完整的水簇。这与水合肽的碰撞诱导解离有很大的不同,其中水的损失是主要的弛豫过程。此外,从几个分辨出的小骨架碎片中获得的作用 NEXAFS 显示,由于附着水分子的 O1s 共振激发,水合 SP 的碎片比裸露的 SP 更多。这种出乎意料的结果激发了进一步的实验发展,以研究第一溶剂化壳层内溶剂到生物分子的可能非局部能量转移。实验得到分子动力学和 DFT 计算的支持,以估计肽和水 O1s 激发区域周围裸露和水合 SP 的共振 X 射线吸收强度。

相似文献

1
Oxygen K-shell spectroscopy of isolated progressively solvated peptide.孤立的逐步溶剂化肽的氧 K 壳层光谱。
Phys Chem Chem Phys. 2020 Jun 21;22(23):12909-12917. doi: 10.1039/d0cp00994f. Epub 2020 Apr 29.
2
Selectivity in fragmentation of N-methylacetamide after resonant K-shell excitation.共振K壳层激发后N-甲基乙酰胺碎片化的选择性
Phys Chem Chem Phys. 2014 Aug 7;16(29):15231-40. doi: 10.1039/c4cp01067a.
3
Near-edge X-ray absorption mass spectrometry of a gas-phase peptide.气相肽的近边 X 射线吸收质谱法。
J Phys Chem A. 2012 Nov 8;116(44):10745-51. doi: 10.1021/jp307527b. Epub 2012 Oct 24.
4
DNA strand breaks by direct energy deposition by Auger and photo-electrons ejected from DNA constituent atoms following K-shell photoabsorption.DNA链断裂是由于K层光吸收后从DNA组成原子中射出的俄歇电子和光电子的直接能量沉积所致。
Int J Radiat Biol. 2004 Nov-Dec;80(11-12):823-32. doi: 10.1080/09553000400017523.
5
Roles of Hydration for Inducing Decomposition of 2-Deoxy-d-ribose by Ionization of Oxygen K-Shell Electrons.水合作用在氧 K 壳层电子电离诱导 2-脱氧-d-核糖分解中的作用。
Radiat Res. 2018 Mar;189(3):264-272. doi: 10.1667/RR14225.1. Epub 2018 Jan 8.
6
Probing Structural Information of Gas-Phase Peptides by Near-Edge X-ray Absorption Mass Spectrometry.通过近边缘 X 射线吸收质谱法探测气相肽的结构信息。
J Am Soc Mass Spectrom. 2021 Mar 3;32(3):670-684. doi: 10.1021/jasms.0c00390. Epub 2021 Feb 12.
7
X-ray Induced Fragmentation of Protonated Cystine.X 射线诱导质子化胱氨酸的碎片化。
J Phys Chem A. 2022 Mar 10;126(9):1496-1503. doi: 10.1021/acs.jpca.1c10158. Epub 2022 Feb 25.
8
Gas-Phase Protein Inner-Shell Spectroscopy by Coupling an Ion Trap with a Soft X-ray Beamline.通过将离子阱与软X射线光束线耦合实现气相蛋白质内壳层光谱学。
J Phys Chem Lett. 2012 May 3;3(9):1191-6. doi: 10.1021/jz300324z. Epub 2012 Apr 22.
9
Hydrogen bonding in acetone clusters probed by near-edge x-ray absorption fine structure spectroscopy in the carbon and oxygen K-edge regions.丙酮团簇中氢键的近边 X 射线吸收精细结构光谱在碳和氧 K 边缘区域的探测。
J Chem Phys. 2009 Nov 7;131(17):174311. doi: 10.1063/1.3257962.
10
Visible and ultraviolet spectroscopy of gas phase protein ions.气相蛋白离子的可见和紫外光谱。
Phys Chem Chem Phys. 2011 Oct 6;13(37):16494-509. doi: 10.1039/c1cp21531k. Epub 2011 Aug 2.

引用本文的文献

1
Structures of Gas-Phase Hydrated Phosphotyrosine Revealed by Soft X-ray Action Spectroscopy.软X射线作用光谱揭示的气相水合磷酸酪氨酸结构
Chemistry. 2025 Feb 17;31(10):e202403665. doi: 10.1002/chem.202403665. Epub 2025 Jan 21.
2
Effect of Protonation on the Molecular Structure of Adenosine 5'-Triphosphate: A Combined Theoretical and Near Edge X-ray Absorption Fine Structure Study.质子化对三磷酸腺苷分子结构的影响:理论与近边 X 射线吸收精细结构研究的结合。
J Phys Chem Lett. 2023 Nov 16;14(45):10173-10180. doi: 10.1021/acs.jpclett.3c01666. Epub 2023 Nov 5.
3
D-Amino acid recognition of tripeptides studied by ultraviolet photodissociation spectroscopy of hydrogen-bonded clusters.
氢键簇的紫外光解离光谱研究三肽中的 D-氨基酸识别。
Amino Acids. 2023 Jul;55(7):931-938. doi: 10.1007/s00726-023-03284-3. Epub 2023 Jun 13.