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通过近边缘 X 射线吸收质谱法探测气相肽的结构信息。

Probing Structural Information of Gas-Phase Peptides by Near-Edge X-ray Absorption Mass Spectrometry.

机构信息

Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.

European XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.

出版信息

J Am Soc Mass Spectrom. 2021 Mar 3;32(3):670-684. doi: 10.1021/jasms.0c00390. Epub 2021 Feb 12.

Abstract

Near-edge X-ray absorption mass spectrometry (NEXAMS) is an action-spectroscopy technique of growing interest for investigations into the spatial and electronic structure of biomolecules. It has been used successfully to give insights into different aspects of the photodissociation of peptides and to probe the conformation of proteins. It is a current question whether the fragmentation pathways are sensitive toward effects of conformational isomerism, tautomerism, and intramolecular interactions in gas-phase peptides. To address this issue, we studied the cationic fragments of cryogenically cooled gas-phase leucine enkephalin ([LeuEnk+H]) and methionine enkephalin ([MetEnk+H]) produced upon soft X-ray photon absorption at the carbon, nitrogen, and oxygen K-edges. The interpretation of the experimental ion yield spectra was supported by density-functional theory and restricted-open-shell configuration interaction with singles (DFT/ROCIS) calculations. The analysis revealed several effects that could not be rationalized based on the peptide's amino acid sequences alone. Clear differences between the partial ion yields measured for both peptides upon C 1s → π*(C═C) excitations in the aromatic amino acid side chains give evidence for a sulfur-aromatic interaction between the methionine and phenylalanine side chain of [MetEnk+H]. Furthermore, a peak associated with N 1s → π*(C═N) transitions, linked to a tautomeric keto-to-enol conversion of peptide bonds, was only present in the photon energy resolved ion yield spectra of [MetEnk+H].

摘要

近边 X 射线吸收质谱(NEXAMS)是一种作用光谱技术,越来越受到关注,用于研究生物分子的空间和电子结构。它已成功用于深入了解肽的光解的不同方面,并探测蛋白质的构象。目前的问题是,在气相肽中,碎片途径是否对构象异构、互变异构和分子内相互作用的影响敏感。为了解决这个问题,我们研究了低温冷却气相亮氨酸脑啡肽([LeuEnk+H])和甲硫氨酸脑啡肽([MetEnk+H])阳离子碎片,这些碎片是在软 X 射线光子吸收碳、氮和氧 K 边时产生的。实验离子产率谱的解释得到了密度泛函理论和单激发受限开壳组态相互作用(DFT/ROCIS)计算的支持。分析表明,有几个效应不能仅根据肽的氨基酸序列来合理化。在芳香族氨基酸侧链中 C 1s → π*(C═C)激发时,[LeuEnk+H]和[MetEnk+H]两种肽的部分离子产率之间存在明显差异,这表明[MetEnk+H]中蛋氨酸和苯丙氨酸侧链之间存在硫-芳族相互作用。此外,与肽键的互变异构酮-烯醇转换相关的 N 1s → π*(C═N)跃迁相关的峰仅存在于[MetEnk+H]的光子能量分辨离子产率谱中。

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