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计算研究配体与大麻素激活的 G 蛋白偶联受体 GPR18 的结合模式。

Computational Investigations on the Binding Mode of Ligands for the Cannabinoid-Activated G Protein-Coupled Receptor GPR18.

机构信息

PharmaCenter Bonn, Pharmaceutical Institute, Pharmaceutical Sciences Bonn (PSB), Pharmaceutical & Medicinal Chemistry, University of Bonn, 53121 Bonn, Germany.

Research Training Group 1873, University of Bonn, 53127 Bonn, Germany.

出版信息

Biomolecules. 2020 Apr 29;10(5):686. doi: 10.3390/biom10050686.

Abstract

GPR18 is an orphan G protein-coupled receptor (GPCR) expressed in cells of the immune system. It is activated by the cannabinoid receptor (CB) agonist ∆-tetrahydrocannabinol (THC). Several further lipids have been proposed to act as GPR18 agonists, but these results still require unambiguous confirmation. In the present study, we constructed a homology model of the human GPR18 based on an ensemble of three GPCR crystal structures to investigate the binding modes of the agonist THC and the recently reported antagonists which feature an imidazothiazinone core to which a (substituted) phenyl ring is connected via a lipophilic linker. Docking and molecular dynamics simulation studies were performed. As a result, a hydrophobic binding pocket is predicted to accommodate the imidazothiazinone core, while the terminal phenyl ring projects towards an aromatic pocket. Hydrophobic interaction of Cys251 with substituents on the phenyl ring could explain the high potency of the most potent derivatives. Molecular dynamics simulation studies suggest that the binding of imidazothiazinone antagonists stabilizes transmembrane regions TM1, TM6 and TM7 of the receptor through a salt bridge between Asp118 and Lys133. The agonist THC is presumed to bind differently to GPR18 than to the distantly related CB receptors. This study provides insights into the binding mode of GPR18 agonists and antagonists which will facilitate future drug design for this promising potential drug target.

摘要

GPR18 是一种孤儿 G 蛋白偶联受体 (GPCR),表达于免疫系统的细胞中。它被大麻素受体 (CB) 激动剂 ∆-四氢大麻酚 (THC) 激活。还有几种进一步的脂质被提议作为 GPR18 激动剂,但这些结果仍需要明确的确认。在本研究中,我们基于三个 GPCR 晶体结构的集合构建了人 GPR18 的同源模型,以研究激动剂 THC 和最近报道的拮抗剂的结合模式,这些拮抗剂的特征是咪唑并噻唑酮核心,通过亲脂性连接子连接(取代)苯基环。进行了对接和分子动力学模拟研究。结果表明,预测存在一个疏水性结合口袋以容纳咪唑并噻唑酮核心,而末端苯基环则朝向芳香口袋。Cys251 与苯基环上取代基的疏水相互作用可以解释最有效衍生物的高效力。分子动力学模拟研究表明,咪唑并噻唑酮拮抗剂的结合通过 Asp118 和 Lys133 之间的盐桥稳定了受体的跨膜区域 TM1、TM6 和 TM7。假定激动剂 THC 与 GPR18 的结合方式与远距离相关的 CB 受体不同。这项研究提供了对 GPR18 激动剂和拮抗剂结合模式的深入了解,这将有助于未来针对这一有前途的潜在药物靶点的药物设计。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1faa/7277601/cc096ca1f508/biomolecules-10-00686-g001.jpg

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