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小分子 G 蛋白对腺苷 A2A 受体变构调节的分子动力学模拟。

Molecular Dynamics Simulations of the Allosteric Modulation of the Adenosine A2A Receptor by a Mini-G Protein.

机构信息

Institut des Biomolécules Max Mousseron (IBMM), CNRS UMR5247, Université de Montpellier, ENSCM, 34090, Montpellier, France.

Centre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, 34090, Montpellier, France.

出版信息

Sci Rep. 2019 Apr 2;9(1):5495. doi: 10.1038/s41598-019-41980-x.

Abstract

Through their coupling to G proteins, G Protein-Coupled Receptors (GPCRs) trigger cellular responses to various signals. Some recent experiments have interestingly demonstrated that the G protein can also act on the receptor by favoring a closed conformation of its orthosteric site, even in the absence of a bound agonist. In this work, we explored such an allosteric modulation by performing extensive molecular dynamics simulations on the adenosine A2 receptor (A2AR) coupled to the Mini-Gs protein. In the presence of the Mini-Gs, we confirmed a restriction of the receptor's agonist binding site that can be explained by a modulation of the intrinsic network of contacts of the receptor. Of interest, we observed similar effects with the C-terminal helix of the Mini-Gs, showing that the observed effect on the binding pocket results from direct local contacts with the bound protein partner that cause a rewiring of the whole receptor's interaction network.

摘要

通过与 G 蛋白偶联,G 蛋白偶联受体(GPCR)可以触发细胞对各种信号的反应。最近的一些实验有趣地表明,即使没有结合的激动剂,G 蛋白也可以通过促进其正位构象的封闭构象来作用于受体。在这项工作中,我们通过对与 Mini-Gs 蛋白偶联的腺苷 A2 受体(A2AR)进行广泛的分子动力学模拟来探索这种变构调节。在 Mini-Gs 的存在下,我们证实了受体激动剂结合位点的限制,这可以通过受体内在接触网络的调节来解释。有趣的是,我们用 Mini-Gs 的 C 端螺旋观察到了类似的效果,表明与结合蛋白伴侣的直接局部接触导致整个受体相互作用网络的重新布线,从而导致结合口袋的观察到的效应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66f3/6445292/44f57bceea31/41598_2019_41980_Fig1_HTML.jpg

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