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免疫共培养细胞微阵列——一种用于淋巴细胞与癌症相互作用高通量功能研究的可行工具。

Immune co-culture cell microarray - a feasible tool for high-throughput functional investigation of lymphocyte-cancer interactions.

作者信息

Baruch Erez Nissim, Ortenberg Rona, Avivi Camila, Anafi Liat, Dick-Necula Daniela, Stossel Chani, Moshkovits Yonatan, Itzhaki Orit, Besser Michal Judith, Schachter Jacob, Barshack Iris, Markel Gal

机构信息

Department of Clinical Immunology and Microbiology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.

The Ella Lemelbaum Institute for Immuno-Oncology, Sheba Medical Center, Tel-HaShomer, Israel.

出版信息

Oncoimmunology. 2020 Mar 25;9(1):1741267. doi: 10.1080/2162402X.2020.1741267. eCollection 2020.

Abstract

Omics analyses often result in dozens to hundreds of potential targets, requiring validation for their biological relevance. Current high-throughput functional investigation methods are frequently labor-intensive, expensive, and display low reproducibility. The Immune Co-Culture Cell Microarray (ICCM) is a formalin-fixed paraffin-embedded cell block microarray based on co-cultures of patient-derived tumor-infiltrating lymphocytes and their autologous melanoma cells. Each ICCM slide represents the same experiment and can be stained using standard immunohistochemistry and immunofluorescence techniques. Functional dynamics assessment of both proteins and microRNAs using ICCM stained slides demonstrated similar findings to flow cytometry assays and to previously published patient-derived biopsy reports.

摘要

组学分析常常会产生数十到数百个潜在靶点,需要对其生物学相关性进行验证。当前的高通量功能研究方法往往劳动强度大、成本高,且重现性低。免疫共培养细胞微阵列(ICCM)是一种基于患者来源的肿瘤浸润淋巴细胞与其自体黑色素瘤细胞共培养的福尔马林固定石蜡包埋细胞块微阵列。每张ICCM玻片代表相同的实验,并且可以使用标准免疫组织化学和免疫荧光技术进行染色。使用ICCM染色玻片对蛋白质和微小RNA进行功能动力学评估,结果与流式细胞术检测以及先前发表的患者来源活检报告相似。

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