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真菌植酸酶的全基因组特征分析及β- propeller 植酸酶和组氨酸酸性磷酸酶的比较研究。

Genome-Scale Characterization of Fungal Phytases and a Comparative Study Between Beta-Propeller Phytases and Histidine Acid Phosphatases.

机构信息

Department of Biochemistry and Molecular Biology, Federal University of Viçosa, Av. PH Rolfs, s/n, Viçosa, MG, 36570-900, Brazil.

Department of Microbiology, Federal University of Viçosa, Viçosa, Brazil.

出版信息

Appl Biochem Biotechnol. 2020 Sep;192(1):296-312. doi: 10.1007/s12010-020-03309-7. Epub 2020 May 6.

Abstract

This work intended to prospect new phytase-producing organisms. In silico genomic analyses allowed the selection of twelve potential phytase-producing fungi. Based on gene sequence, it was possible to identify four well-defined groups of phytate-degrading enzymes: esterase-like, β-propeller phytases (βPP), phosphoglycerate mutase-like, and phytases of the histidine acid phosphatases (HAP) family. Analysis of the predicted genes encoding phytases belonging to the HAP family and βPP phytases and in silico characterization of these enzymes indicated divergence among the catalytic activities. Predicted fungal βPP phytases exhibited higher molecular mass (around 77 kDa) probably due to the epidermal growth factor-like domain. Twelve sequences of phytases contained signal peptides, of which seven were classified as HAP and five as βPP phytases, while ten sequences were predicted as phytases secreted by non-classical pathways. These fungi were grown in liquid or semi-solid medium, and the fungal enzymatic extracts were evaluated for their ability to hydrolyze sodium phytate at 50 °C and pH ranging from 2.0 to 9.0. Seven fungi were identified as phytase producers based on phosphate release under enzyme assay conditions. Results obtained from in silico analyses combining experimental enzymatic activities suggest that some selected fungi could secrete βPP phytases and HAP phytases.

摘要

这项工作旨在寻找新的植酸酶产生菌。基于基因序列,通过计算机基因组分析,我们筛选出了 12 种潜在的产植酸酶真菌。可以识别出 4 种明确的植酸盐降解酶:酯酶样、β-折叠植酸酶(βPP)、磷酸甘油酸变位酶样和组氨酸酸性磷酸酶(HAP)家族的植酸酶。对属于 HAP 家族和 βPP 植酸酶的预测基因进行分析,并对这些酶进行计算机模拟特性分析,表明它们的催化活性存在差异。预测的真菌 βPP 植酸酶的分子量较高(约 77 kDa),可能是由于存在表皮生长因子样结构域。12 个植酸酶序列含有信号肽,其中 7 个被分类为 HAP,5 个为 βPP 植酸酶,而 10 个序列被预测为非经典途径分泌的植酸酶。这些真菌在液体或半固体培养基中生长,然后评估真菌酶提取物在 50°C 和 pH 值为 2.0 至 9.0 条件下水解植酸钠的能力。根据酶测定条件下磷酸盐的释放情况,有 7 种真菌被鉴定为植酸酶产生菌。计算机分析与实验酶活性相结合的结果表明,一些选定的真菌可能会分泌 βPP 植酸酶和 HAP 植酸酶。

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