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XynDZ5:一种新型耐热性GH10木聚糖酶。

XynDZ5: A New Thermostable GH10 Xylanase.

作者信息

Zarafeta Dimitra, Galanopoulou Anastasia P, Leni Maria Evangelia, Kaili Stavroula I, Chegkazi Magda S, Chrysina Evangelia D, Kolisis Fragiskos N, Hatzinikolaou Dimitris G, Skretas Georgios

机构信息

Institute of Chemical Biology, National Hellenic Research Foundation, Athens, Greece.

Department of Biology, Enzyme and Microbial Biotechnology Unit, National and Kapodistrian University of Athens, Athens, Greece.

出版信息

Front Microbiol. 2020 Apr 24;11:545. doi: 10.3389/fmicb.2020.00545. eCollection 2020.

DOI:10.3389/fmicb.2020.00545
PMID:32390953
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7193231/
Abstract

Xylanolytic enzymes have a broad range of applications in industrial biotechnology as biocatalytic components of various processes and products, such as food additives, bakery products, coffee extraction, agricultural silage and functional foods. An increasing market demand has driven the growing interest for the discovery of xylanases with specific industrially relevant characteristics, such as stability at elevated temperatures and in the presence of other denaturing factors, which will facilitate their incorporation into industrial processes. In this work, we report the discovery and biochemical characterization of a new thermostable GH10 xylanase, termed XynDZ5, exhibiting only 26% amino acid sequence identity to the closest characterized xylanolytic enzyme. This new enzyme was discovered in an Icelandic hot spring enrichment culture of a species using a recently developed bioinformatic analysis platform. XynDZ5 was produced recombinantly in , purified and characterized biochemically. This analysis revealed that it acts as an endo-1,4-β-xylanase that performs optimally at 65-75°C and pH 7.5. The enzyme is capable of retaining high levels of catalytic efficiency after several hours of incubation at high temperatures, as well as in the presence of significant concentrations of a range of metal ions and denaturing agents. Interestingly, the XynDZ5 biochemical profile was found to be atypical, as it also exhibits significant exo-activity. Computational modeling of its three-dimensional structure predicted a (β/α) TIM barrel fold, which is very frequently encountered among family GH10 enzymes. This modeled structure has provided clues about structural features that may explain aspects of its catalytic performance. Our results suggest that XynDZ5 represents a promising new candidate biocatalyst appropriate for several high-temperature biotechnological applications in the pulp, paper, baking, animal-feed and biofuel industries.

摘要

木聚糖分解酶在工业生物技术中有着广泛应用,可作为各种工艺和产品的生物催化成分,如食品添加剂、烘焙食品、咖啡萃取、农业青贮饲料和功能性食品等。市场需求的不断增加,促使人们对发现具有特定工业相关特性的木聚糖酶的兴趣日益浓厚,这些特性包括在高温及其他变性因素存在下的稳定性,这将有助于它们融入工业生产过程。在这项研究中,我们报告了一种新型耐热GH10木聚糖酶XynDZ5的发现及其生化特性,它与已鉴定的最相近的木聚糖分解酶的氨基酸序列同一性仅为26%。这种新酶是利用最近开发的生物信息分析平台,在冰岛温泉中一种物种的富集培养物中发现的。XynDZ5通过重组表达、纯化并进行了生化特性鉴定。分析表明,它作为一种内切-1,4-β-木聚糖酶,在65-75°C和pH 7.5条件下表现最佳。该酶在高温下孵育数小时后,以及在存在高浓度多种金属离子和变性剂的情况下,仍能保持较高的催化效率。有趣的是,XynDZ5的生化特征是非典型的,因为它还表现出显著的外切活性。对其三维结构的计算建模预测其具有(β/α) TIM桶状折叠结构,这在GH10家族酶中非常常见。这种建模结构为解释其催化性能的结构特征提供了线索。我们的结果表明,XynDZ5是一种有前景的新型生物催化剂,适用于纸浆、造纸、烘焙、动物饲料和生物燃料等行业的多种高温生物技术应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/eba2cf787056/fmicb-11-00545-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/347433fe1912/fmicb-11-00545-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/d5f6dd0014bc/fmicb-11-00545-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/b2299b0c7a6c/fmicb-11-00545-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/c0f0dc818b44/fmicb-11-00545-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/42dd3780c974/fmicb-11-00545-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/17c6790aad0f/fmicb-11-00545-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/fc32fcd84b98/fmicb-11-00545-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/eba2cf787056/fmicb-11-00545-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/347433fe1912/fmicb-11-00545-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/d5f6dd0014bc/fmicb-11-00545-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/b2299b0c7a6c/fmicb-11-00545-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/c0f0dc818b44/fmicb-11-00545-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/42dd3780c974/fmicb-11-00545-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/17c6790aad0f/fmicb-11-00545-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/fc32fcd84b98/fmicb-11-00545-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8175/7193231/eba2cf787056/fmicb-11-00545-g008.jpg

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