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尿道下裂中代谢组的严重程度依赖性特征

Severity-Dependent Profile of the Metabolome in Hypospadias.

作者信息

Piñeyro-Ruiz Coriness, Chorna Nataliya E, Pérez-Brayfield Marcos Raymond, Jorge Juan Carlos

机构信息

Department of Anatomy and Neurobiology, School of Medicine, University of Puerto Rico, San Juan, United States.

Department of Biochemistry, PR-INBRE Metabolomics Research Core, University of Puerto Rico, Medical Sciences Campus, San Juan, United States.

出版信息

Front Pediatr. 2020 Apr 24;8:202. doi: 10.3389/fped.2020.00202. eCollection 2020.

Abstract

Hypospadias, characterized by the displacement of the opening of the urethra at any point in the medial-ventral side of the penis, is classified upon severity as mild (Type I) and severe (Type II and Type III) hypospadias. Hypospadias' etiology is idiopathic in the majority of cases, and underlying causes seem of multifactorial origin. Studies regarding genetic variants support this notion. It is unknown whether downstream gene products fit this profile. This study evaluated the metabolome of hypospadias by using the emerging technology of metabolomics in the search for distinct cellular processes associated with hypospadias' etiology according to the severity of this congenital urogenital condition. Foreskin samples were collected during urethroplasty from boys with Type I, II, and III hypospadias or undergoing elective circumcision ( = 28) between 5 and 28 months of age. Samples were processed and submitted to gas chromatography-mass spectrometry (GC/MS). MetaboloAnalyst (http://www.metaboanalyst.ca/) online platform was used for bioinformatic analyses. Thirty-five metabolites across experimental groups were identified by GC/MS. Principal component analysis (PCA) and partial least squares-discriminant analysis (PLS-DA) showed that the metabolome of Type II and Type III hypospadias patients differs from the metabolome of Type I hypospadias and control patients. Of those 35, 10 amino acids were found in significantly low concentrations in severe hypospadias: aspartate, glutamate, glycine, isoleucine, leucine, lysine, methionine, phenylalanine, proline, and tyrosine. A high concentration of the amino acid lysine was detected in mild hypospadias. The observed downregulation of specific amino acids in severe hypospadias provides alternative routes for future research aiming to identify disrupted networks and pathways while considering the severity of hypospadias.

摘要

尿道下裂的特征是尿道开口在阴茎腹内侧的任何位置出现移位,根据严重程度可分为轻度(I型)和重度(II型和III型)尿道下裂。在大多数情况下,尿道下裂的病因是特发性的,其潜在原因似乎是多因素的。关于基因变异的研究支持了这一观点。目前尚不清楚下游基因产物是否符合这一情况。本研究利用新兴的代谢组学技术评估尿道下裂的代谢组,以寻找与这种先天性泌尿生殖系统疾病病因相关的不同细胞过程,并根据尿道下裂的严重程度进行分析。在尿道成形术期间,从年龄在5至28个月的I型、II型和III型尿道下裂男孩或接受选择性包皮环切术的男孩(n = 28)中采集包皮样本。对样本进行处理后,采用气相色谱 - 质谱联用(GC/MS)分析。使用MetaboloAnalyst(http://www.metaboanalyst.ca/)在线平台进行生物信息学分析。通过GC/MS在各实验组中鉴定出35种代谢物。主成分分析(PCA)和偏最小二乘判别分析(PLS - DA)表明,II型和III型尿道下裂患者的代谢组与I型尿道下裂患者和对照组患者的代谢组不同。在这35种代谢物中,发现10种氨基酸在重度尿道下裂中浓度显著降低:天冬氨酸、谷氨酸、甘氨酸、异亮氨酸、亮氨酸、赖氨酸、蛋氨酸、苯丙氨酸、脯氨酸和酪氨酸。在轻度尿道下裂中检测到高浓度的氨基酸赖氨酸。在重度尿道下裂中观察到特定氨基酸的下调,为未来旨在识别 disrupted networks and pathways 同时考虑尿道下裂严重程度的研究提供了替代途径。 (注:原文中“disrupted networks and pathways”未明确准确含义,按原文翻译)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e04/7192966/f992caacecfd/fped-08-00202-g0001.jpg

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