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来自蝙蝠冠状病毒HKU4的SARS独特结构域C的结构

Structure of the SARS-Unique Domain C From the Bat Coronavirus HKU4.

作者信息

Staup Andrew J, De Silva Ivon U, Catt Justin T, Tan Xuan, Hammond Robert G, Johnson Margaret A

机构信息

Department of Chemistry, 1720 2nd Avenue S. CHEM 201, University of Alabama at Birmingham, AL, USA.

Department of Chemistry, 1720 2nd Avenue S. CHEM 274, University of Alabama at Birmingham, AL, USA.

出版信息

Nat Prod Commun. 2019 May 27;14(5):1934578X19849202. doi: 10.1177/1934578X19849202. eCollection 2019 May.

DOI:10.1177/1934578X19849202
PMID:32395093
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7206560/
Abstract

Coronaviruses (CoVs) that cause infections such as severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome phylogenetically originate from bat CoVs. The coronaviral nonstructural protein 3 (nsp3) has been implicated in viral replication, polyprotein cleavage, and host immune interference. We report the structure of the C domain from the SARS-Unique Domain of bat CoV HKU4. The protein has a frataxin fold, consisting of 5 antiparallel β strands packed against 2 α helices. Bioinformatics analyses and nuclear magnetic resonance experiments were conducted to investigate the function of HKU4 C. The results showed that HKU4 C engages in protein-protein interactions with the nearby M domain of nsp3. The HKU4 C residues involved in protein-protein interactions are conserved in group 2c CoVs, indicating a conserved function.

摘要

引起严重急性呼吸综合征(SARS)和中东呼吸综合征等感染的冠状病毒在系统发育上起源于蝙蝠冠状病毒。冠状病毒非结构蛋白3(nsp3)与病毒复制、多聚蛋白切割及宿主免疫干扰有关。我们报道了蝙蝠冠状病毒HKU4的SARS-独特结构域C结构域的结构。该蛋白具有铁硫蛋白折叠结构,由5条反平行β链与2条α螺旋堆积而成。进行了生物信息学分析和核磁共振实验以研究HKU4 C的功能。结果表明,HKU4 C与nsp3附近的M结构域发生蛋白质-蛋白质相互作用。参与蛋白质-蛋白质相互作用的HKU4 C残基在2c组冠状病毒中保守,表明其功能保守。

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本文引用的文献

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SARS-unique fold in the Rousettus bat coronavirus HKU9.埃及果蝠冠状病毒HKU9中独特的SARS样折叠结构
Protein Sci. 2017 Sep;26(9):1726-1737. doi: 10.1002/pro.3208. Epub 2017 Jun 15.
2
COFACTOR: improved protein function prediction by combining structure, sequence and protein-protein interaction information.协同因子:通过结合结构、序列和蛋白质-蛋白质相互作用信息来改进蛋白质功能预测。
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The Conserved Coronavirus Macrodomain Promotes Virulence and Suppresses the Innate Immune Response during Severe Acute Respiratory Syndrome Coronavirus Infection.
保守的冠状病毒大结构域在严重急性呼吸综合征冠状病毒感染期间促进病毒毒力并抑制先天免疫反应。
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p53 down-regulates SARS coronavirus replication and is targeted by the SARS-unique domain and PLpro via E3 ubiquitin ligase RCHY1.p53下调严重急性呼吸综合征冠状病毒的复制,并被严重急性呼吸综合征独特结构域和木瓜蛋白酶样蛋白酶通过E3泛素连接酶RCHY1靶向作用。
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ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules.ConSurf 2016:一种用于估计和可视化大分子进化保守性的改进方法。
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Bat origin of human coronaviruses.人类冠状病毒的蝙蝠起源
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