从印度尼西亚雅加达芝多·曼古库苏莫国立医院血流感染患者中分离出的全基因组测序数据。
Whole genome sequencing data of isolated from bloodstream infection patients in Cipto Mangunkusumo National Hospital, Jakarta, Indonesia.
作者信息
Nelwan Erni Juwita, Puspandari Nelly, Paramita Rafika Indah, Erlina Linda, Renesteen Editha, Fadilah Fadilah
机构信息
Department of Internal Medicine, Faculty of Medicine, Universitas Indonesia, Salemba Raya street number 6, Jakarta, Indonesia - 10430.
Infectious Disease and Immunology Research Center - IMERI, Faculty of Medicine, Universitas Indonesia. Salemba Raya street number 6, Jakarta, Indonesia - 10430.
出版信息
Data Brief. 2020 Apr 30;30:105631. doi: 10.1016/j.dib.2020.105631. eCollection 2020 Jun.
Bloodstream infections (BSIs) are some of the most devastating preventable complications in critical care units. Of the bacterial causes of BSIs, is the most common among Enterobacteriaceae. Bacteria resistant to therapeutic antibiotics represent a significant global health challenge. In this study, we present whole genome sequence data of 22 isolates that were obtained from bloodstream infection patients admitted to Cipto Mangunkusumo National Hospital, Jakarta, Indonesia. These data will be useful for analysing the serotypes, virulence genes, and antimicrobial resistance genes of DNA sequences of were obtained using the Illumina MiSeq platform. The FASTQ raw files of these sequences are available under BioProject accession number PRJNA596854 and Sequence Read Archive accession numbers SRR10761126-SRR10761147.
血流感染（BSIs）是重症监护病房中一些最具破坏性的可预防并发症。在导致BSIs的细菌病因中， 是肠杆菌科中最常见的。对治疗性抗生素耐药的细菌是一项重大的全球健康挑战。在本研究中，我们展示了从印度尼西亚雅加达Cipto Mangunkusumo国家医院收治的血流感染患者中分离出的22株 菌株的全基因组序列数据。这些数据将有助于分析 的血清型、毒力基因和抗菌耐药基因。 使用Illumina MiSeq平台获得了 的DNA序列。这些序列的FASTQ原始文件可在生物项目登录号PRJNA596854和序列读取存档登录号SRR10761126 - SRR10761147下获取。
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