Sepulveda Jorge, Westblade Lars F, Whittier Susan, Satlin Michael J, Greendyke William G, Aaron Justin G, Zucker Jason, Dietz Donald, Sobieszczyk Magdalena, Choi Justin J, Liu Dakai, Russell Sarah, Connelly Charles, Green Daniel A
Department of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, New York, USA.
Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, USA.
J Clin Microbiol. 2020 Jul 23;58(8). doi: 10.1128/JCM.00875-20.
A surge of patients with coronavirus disease 2019 (COVID-19) presenting to New York City hospitals in March 2020 led to a sharp increase in blood culture utilization, which overwhelmed the capacity of automated blood culture instruments. We sought to evaluate the utilization and diagnostic yield of blood cultures during the COVID-19 pandemic to determine prevalence and common etiologies of bacteremia and to inform a diagnostic approach to relieve blood culture overutilization. We performed a retrospective cohort analysis of 88,201 blood cultures from 28,011 patients at a multicenter network of hospitals within New York City to evaluate order volume, positivity rate, time to positivity, and etiologies of positive cultures in COVID-19. Ordering volume increased by 34.8% in the second half of March 2020 compared to the level in the first half of the month. The rate of bacteremia was significantly lower among COVID-19 patients (3.8%) than among COVID-19-negative patients (8.0%) and those not tested (7.1%) ( < 0.001). COVID-19 patients had a high proportion of organisms reflective of commensal skin microbiota, which, when excluded, reduced the bacteremia rate to 1.6%. More than 98% of all positive cultures were detected within 4 days of incubation. Bloodstream infections are very rare for COVID-19 patients, which supports the judicious use of blood cultures in the absence of compelling evidence for bacterial coinfection. Clear communication with ordering providers is necessary to prevent overutilization of blood cultures during patient surges, and laboratories should consider shortening the incubation period from 5 days to 4 days, if necessary, to free additional capacity.
2020年3月,大量2019冠状病毒病(COVID-19)患者涌入纽约市医院,导致血培养的使用量急剧增加,使自动化血培养仪器不堪重负。我们试图评估COVID-19大流行期间血培养的使用情况和诊断率,以确定菌血症的患病率和常见病因,并为缓解血培养过度使用的诊断方法提供依据。我们对纽约市多中心医院网络中28011名患者的88201份血培养进行了回顾性队列分析,以评估COVID-19患者血培养的医嘱量、阳性率、阳性时间及阳性培养物的病因。与3月上半月相比,2020年3月下半月的医嘱量增加了34.8%。COVID-19患者的菌血症发生率(3.8%)显著低于COVID-19阴性患者(8.0%)和未检测患者(7.1%)(<0.001)。COVID-19患者中反映共生皮肤微生物群的微生物比例较高,排除这些微生物后,菌血症发生率降至1.6%。超过98%的阳性培养物在培养4天内被检测到。COVID-19患者的血流感染非常罕见,这支持在没有细菌合并感染的确凿证据时明智地使用血培养。在患者激增期间,与开医嘱的医生进行清晰沟通对于防止血培养过度使用很有必要,并且实验室应在必要时考虑将培养期从5天缩短至4天,以释放更多容量。