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为什么发现黏附侵袭性分子标记物如此具有挑战性?

Why the discovery of adherent-invasive molecular markers is so challenging?

作者信息

Camprubí-Font Carla, Martinez-Medina Margarita

机构信息

Laboratory of Molecular Microbiology, Department of Biology, University of Girona, Girona 17003, Spain.

出版信息

World J Biol Chem. 2020 Apr 7;11(1):1-13. doi: 10.4331/wjbc.v11.i1.1.

DOI:10.4331/wjbc.v11.i1.1
PMID:32405343
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7205867/
Abstract

Adherent-invasive (AIEC) strains have been extensively related to Crohn's disease (CD) etiopathogenesis. Higher AIEC prevalence in CD patients versus controls has been reported, and its mechanisms of pathogenicity have been linked to CD physiopathology. In CD, the therapeutic armamentarium remains limited and non-curative; hence, the necessity to better understand AIEC as a putative instigator or propagator of the disease is certain. Nonetheless, AIEC identification is currently challenging because it relies on phenotypic assays based on infected cell cultures which are highly time-consuming, laborious and non-standardizable. To address this issue, AIEC molecular mechanisms and virulence genes have been studied; however, a specific and widely distributed genetic AIEC marker is still missing. The finding of molecular tools to easily identify AIEC could be useful in the identification of AIEC carriers who could profit from personalized treatment. Also, it would significantly promote AIEC epidemiological studies. Here, we reviewed the existing data regarding AIEC genetics and presented those molecular markers that could assist with AIEC identification. Finally, we highlighted the problems behind the discovery of exclusive AIEC biomarkers and proposed strategies to facilitate the search of AIEC signature sequences.

摘要

粘附侵袭性(AIEC)菌株与克罗恩病(CD)的病因发病机制密切相关。已有报道称,与对照组相比,CD患者中AIEC的患病率更高,其致病机制与CD的生理病理学相关。在CD中,治疗手段仍然有限且无法治愈;因此,有必要更好地了解AIEC作为该疾病的潜在引发者或传播者。尽管如此,目前AIEC的鉴定具有挑战性,因为它依赖于基于感染细胞培养的表型分析,这种分析非常耗时、费力且不可标准化。为了解决这个问题,人们对AIEC的分子机制和毒力基因进行了研究;然而,仍然缺少一种特异性且广泛分布的AIEC基因标记。找到能够轻松鉴定AIEC的分子工具,可能有助于识别那些能够从个性化治疗中获益的AIEC携带者。此外,这将显著促进AIEC的流行病学研究。在此,我们回顾了有关AIEC遗传学的现有数据,并介绍了有助于AIEC鉴定的分子标记。最后,我们强调了发现AIEC特异性生物标志物背后的问题,并提出了促进寻找AIEC特征序列的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/662a/7205867/28f572e95ec0/WJBC-11-1-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/662a/7205867/28f572e95ec0/WJBC-11-1-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/662a/7205867/28f572e95ec0/WJBC-11-1-g001.jpg

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本文引用的文献

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Amino Acid Substitutions and Differential Gene Expression of Outer Membrane Proteins in Adherent-Invasive .粘附侵袭性外膜蛋白中的氨基酸取代与差异基因表达
Front Microbiol. 2019 Aug 6;10:1707. doi: 10.3389/fmicb.2019.01707. eCollection 2019.
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Genetic and Phenotypic Features to Screen for Putative Adherent-Invasive .用于筛选假定的黏附侵袭性的遗传和表型特征
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Metabolic adaptation of adherent-invasive Escherichia coli to exposure to bile salts.
The Role of Propionate-Induced Rearrangement of Membrane Proteins in the Formation of the Virulent Phenotype of Crohn's Disease-Associated Adherent-Invasive .
丙酸诱导的膜蛋白重排在与克罗恩病相关的黏附侵袭性大肠杆菌毒力表型形成中的作用
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Colonization of larval zebrafish () with adherent-invasive prevents recovery of the intestinal mucosa from drug-induced enterocolitis.用黏附侵袭性 定植幼斑马鱼 () 可阻止肠道黏膜从药物诱导的肠炎中恢复。
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Characterizing the Pathogenic Potential of Crohn's Disease-Associated Adherent-Invasive .表征克罗恩病相关黏附侵袭性的致病潜力
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