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PHASTER: a better, faster version of the PHAST phage search tool.PHASTER:PHAST噬菌体搜索工具的一个更好、更快的版本。
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. doi: 10.1093/nar/gkw387. Epub 2016 May 3.
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The Clinical Urine Culture: Enhanced Techniques Improve Detection of Clinically Relevant Microorganisms.临床尿培养:改进技术提高临床相关微生物的检测率
J Clin Microbiol. 2016 May;54(5):1216-22. doi: 10.1128/JCM.00044-16. Epub 2016 Mar 9.
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Proteus mirabilis and Urinary Tract Infections.奇异变形杆菌与尿路感染。
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RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.RASTtk:一种用于构建定制注释管道和批量注释基因组的RAST算法的模块化可扩展实现。
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
7
Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.尿液并非无菌:采用强化尿液培养技术检测成年女性膀胱中的常驻细菌菌群。
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8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
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从女性尿道分离出的奇异变形杆菌UMB1310的基因组序列草图

Draft Genome Sequence of Proteus mirabilis UMB1310, Isolated from the Female Urinary Tract.

作者信息

Allen Olivia, Miller-Ensminger Taylor, Voukadinova Adelina, Wolfe Alan J, Putonti Catherine

机构信息

Department of Biology, Loyola University Chicago, Chicago, Illinois, USA.

Bioinformatics Program, Loyola University Chicago, Chicago, Illinois, USA.

出版信息

Microbiol Resour Announc. 2020 May 14;9(20):e00390-20. doi: 10.1128/MRA.00390-20.

DOI:10.1128/MRA.00390-20
PMID:32409548
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7225547/
Abstract

is a Gram-negative bacterium that is linked to common complications within the urinary tract. Here, we present the draft genome for UMB1310, which was isolated from the urine of a woman with a urinary tract infection.

摘要

是一种革兰氏阴性菌,与泌尿道内的常见并发症有关。在此,我们展示了UMB1310的基因组草图,该菌株是从一名患有尿路感染的女性尿液中分离出来的。