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结直肠癌细胞与正常结肠黏膜细胞的蛋白质组学特征分析:寻找结直肠癌新的诊断蛋白生物标志物。

Proteomic Characterization of Colorectal Cancer Cells versus Normal-Derived Colon Mucosa Cells: Approaching Identification of Novel Diagnostic Protein Biomarkers in Colorectal Cancer.

机构信息

Department of Clinical Medicine, Aarhus University Hospital, Aarhus, DK-8200 Aarhus N, Denmark.

Department of Hematology, Aarhus University Hospital, Aarhus, DK-8200 Aarhus N, Denmark.

出版信息

Int J Mol Sci. 2020 May 14;21(10):3466. doi: 10.3390/ijms21103466.

Abstract

In the western world, colorectal cancer (CRC) is the third most common cause of cancer-related deaths. Survival is closely related to the stage of cancer at diagnosis striking the clinical need for biomarkers capable of early detection. To search for possible biological parameters for early diagnosis of CRC we evaluated protein expression for three CREC (acronym: ab45, eticulocalbin, RC-55, alumenin) proteins: reticulocalbin, calumenin, and ERC-55 in a cellular model consisting of a normal derived colon mucosa cell line, NCM460, and a primary adenocarcinoma cell line of the colon, SW480. Furthermore, this cellular model was analyzed by a top-down proteomic approach, 2-dimensional polyacrylamide gel electrophoresis (2D-PAGE) and liquid chromatography-tandem mass spectrometry (LC-MS/MS) for novel putative diagnostic markers by identification of differentially expressed proteins between the two cell lines. A different colorectal carcinoma cell line, HCT 116, was used in a bottom-up proteomic approach with label-free quantification (LFQ) LC-MS/MS. The two cellular models gave sets of putative diagnostic CRC biomarkers. Various of these novel putative markers were verified with increased expression in CRC patient neoplastic tissue compared to the expression in a non-involved part of the colon, including reticulocalbin, calumenin, S100A6 and protein SET. Characterization of these novel identified biological features for CRC patients may have diagnostic potential and therapeutic relevance in this malignancy characterized by a still unmet clinical need.

摘要

在西方世界,结直肠癌(CRC)是癌症相关死亡的第三大主要原因。生存与癌症诊断时的阶段密切相关,这突显了临床对能够进行早期检测的生物标志物的需求。为了寻找 CRC 早期诊断的可能生物学参数,我们评估了三个 CREC(缩写:ab45、eticulocalbin、RC-55、alumenin)蛋白在一个由正常衍生的结肠黏膜细胞系 NCM460 和结肠原发性腺癌细胞系 SW480 组成的细胞模型中的蛋白表达。此外,通过自上而下的蛋白质组学方法、二维聚丙烯酰胺凝胶电泳(2D-PAGE)和液相色谱-串联质谱(LC-MS/MS)分析了该细胞模型,通过鉴定两种细胞系之间差异表达的蛋白来寻找新的潜在诊断标志物。使用另一种结直肠癌细胞系 HCT 116 进行了自下而上的蛋白质组学方法,采用无标记定量(LFQ)LC-MS/MS。这两种细胞模型提供了一组潜在的 CRC 诊断生物标志物。与结直肠非受累部分的表达相比,包括 reticulocalbin、calumenin、S100A6 和 protein SET 在内的各种新型潜在标志物在 CRC 患者肿瘤组织中的表达增加,这些标志物得到了验证。这些新鉴定的 CRC 患者生物学特征的特征可能具有诊断潜力,并在这种仍未满足临床需求的恶性肿瘤中具有治疗相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b01/7278953/b64c7edb0795/ijms-21-03466-g001.jpg

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