从一名有复发性尿路感染症状的女性身上分离出的咽峡炎链球菌UMB7768的基因组序列草图
Draft Genome Sequence of Streptococcus anginosus UMB7768, Isolated from a Woman with Recurrent UTI Symptoms.
作者信息
Miller Sarah, Miller-Ensminger Taylor, Voukadinova Adelina, Wolfe Alan J, Putonti Catherine
机构信息
Bioinformatics Program, Loyola University Chicago, Chicago, Illinois, USA.
Department of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA.
出版信息
Microbiol Resour Announc. 2020 May 21;9(21):e00418-20. doi: 10.1128/MRA.00418-20.
Abstract
recently was implicated as a pathogen involved in urinary tract infections. A strain of was isolated from the female urogenital tract. Here, we present the draft genome sequence of strain UMB7768.
摘要
最近被认为是涉及尿路感染的一种病原体。从女性泌尿生殖道分离出了一株[该病原体名称未给出]。在此，我们展示了[该病原体名称未给出]菌株UMB7768的基因组序列草图。
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3
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Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
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Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
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