UMR 1062 Centre de Biologie pour la Gestion des Populations, INRA, CIRAD, IRD, Montpellier SupAgro, Univ. Montpellier, 755 avenue du campus Agropolis, Montpellier, France.
Microbiome. 2020 May 22;8(1):72. doi: 10.1186/s40168-020-00865-2.
Obligate symbiotic associations are present in a wide variety of animals with a nutrient-restricted diet. Aphids (hemiptera: Aphididae) almost-universally host Buchnera aphidicola bacteria in specialised organs (called bacteriomes). These bacteria supply the aphid with essential nutrients lacking from their diet (i.e. essential amino acids and some B vitamins). Some aphid lineages, such as species from the Lacninae subfamily, have evolved co-obligate associations with secondary endosymbionts, deriving from a loss of biotin- and riboflavin-biosynthetic genes. In this study, I re-analyse previously published sequencing data from the banana aphid Pentalonia nigronervosa. I show that the metabolic inference results from De Clerck et al. (Microbiome 3:63, 2015) are incorrect and possibly arise from the use of inadequate methods. Additionally, I discuss how the seemingly biased interpretation of their antibiotic treatment analyses together with an incorrect genome-based metabolic inference resulted in the erroneous suggestion "that a co-obligatory symbiosis between B. aphidicola and Wolbachia occurs in the banana aphid".
强制性共生关系存在于各种营养受限饮食的动物中。蚜虫(半翅目:蚜科)几乎普遍在专门的器官(称为细菌体)中寄生 Buchnera aphidicola 细菌。这些细菌为蚜虫提供饮食中缺乏的必需营养素(即必需氨基酸和一些 B 族维生素)。一些蚜虫谱系,如来自 Lacninae 亚科的物种,已经进化出与次生内共生体的共同强制性共生关系,这是由于生物素和核黄素生物合成基因的丧失而产生的。在这项研究中,我重新分析了以前发表的香蕉蚜虫 Pentalonia nigronervosa 的测序数据。我表明,De Clerck 等人的代谢推断结果(Microbiome 3:63, 2015)是不正确的,可能是由于使用了不适当的方法。此外,我还讨论了他们抗生素处理分析的看似有偏见的解释以及基于基因组的不正确代谢推断如何导致错误的建议“B. aphidicola 和 Wolbachia 之间存在共同强制性共生关系在香蕉蚜虫中发生”。