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对快速生长的蓝藻PCC 11801进行代谢工程改造以实现光自养生产琥珀酸

Metabolic engineering of a fast-growing cyanobacterium PCC 11801 for photoautotrophic production of succinic acid.

作者信息

Sengupta Shinjinee, Jaiswal Damini, Sengupta Annesha, Shah Shikha, Gadagkar Shruti, Wangikar Pramod P

机构信息

1Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai, 400076 India.

2DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai, 400076 India.

出版信息

Biotechnol Biofuels. 2020 May 18;13:89. doi: 10.1186/s13068-020-01727-7. eCollection 2020.

Abstract

BACKGROUND

Cyanobacteria, a group of photosynthetic prokaryotes, are being increasingly explored for direct conversion of carbon dioxide to useful chemicals. However, efforts to engineer these photoautotrophs have resulted in low product titers. This may be ascribed to the bottlenecks in metabolic pathways, which need to be identified for rational engineering. We engineered the recently reported, fast-growing and robust cyanobacterium, PCC 11801 to produce succinate, an important platform chemical. Previously, engineering of the model cyanobacterium PCC 7942 has resulted in succinate titer of 0.43 g l in 8 days.

RESULTS

Building on the previous report, expression of α-ketoglutarate decarboxylase, succinate semialdehyde dehydrogenase and phosphoenolpyruvate carboxylase yielded a succinate titer of 0.6 g l in 5 days suggesting that PCC 11801 is better suited as host for production. Profiling of the engineered strains for 57 intermediate metabolites, a number of enzymes and qualitative analysis of key transcripts revealed potential flux control points. Based on this, we evaluated the effects of overexpression of sedoheptulose-1,7-bisphosphatase, citrate synthase and succinate transporters and knockout of succinate dehydrogenase and glycogen synthase A. The final construct with seven genes overexpressed and two genes knocked out resulted in photoautotrophic production of 0.93 g l succinate in 5 days.

CONCLUSION

While the fast-growing strain PCC 11801 yielded a much higher titer than the model strain, the efficient photoautotrophy of this novel isolate needs to be harnessed further for the production of desired chemicals. Engineered strains of PCC 11801 showed dramatic alterations in the levels of several metabolites suggesting far reaching effects of pathway engineering. Attempts to overexpress enzymes deemed to be flux controlling led to the emergence of other potential rate-limiting steps. Thus, this process of debottlenecking of the pathway needs to be repeated several times to obtain a significantly superior succinate titer.

摘要

背景

蓝藻是一类光合原核生物,人们越来越多地探索利用它们将二氧化碳直接转化为有用的化学品。然而,对这些光合自养生物进行工程改造的努力导致产物滴度较低。这可能归因于代谢途径中的瓶颈,需要确定这些瓶颈以进行合理的工程改造。我们对最近报道的生长迅速且健壮的蓝藻PCC 11801进行工程改造,使其生产琥珀酸,一种重要的平台化学品。此前,对模式蓝藻PCC 7942进行工程改造,在8天内琥珀酸滴度达到0.43 g/l。

结果

在之前的报道基础上,表达α-酮戊二酸脱羧酶、琥珀酸半醛脱氢酶和磷酸烯醇式丙酮酸羧化酶,在5天内琥珀酸滴度达到0.6 g/l,这表明PCC 11801更适合作为生产宿主。对工程菌株的57种中间代谢物进行分析、对多种酶进行分析以及对关键转录本进行定性分析,揭示了潜在的通量控制点。基于此,我们评估了景天庚酮糖-1,7-二磷酸酶、柠檬酸合酶和琥珀酸转运蛋白过表达以及琥珀酸脱氢酶和糖原合酶A敲除的效果。最终构建的菌株过表达7个基因并敲除2个基因,在5天内实现了光合自养生产0.93 g/l琥珀酸。

结论

虽然快速生长的菌株PCC 11801的滴度比模式菌株高得多,但这种新型分离株的高效光合自养能力需要进一步用于生产所需的化学品。PCC 11801的工程菌株在几种代谢物水平上表现出显著变化,表明途径工程具有深远影响。试图过表达被认为是通量控制的酶导致出现其他潜在的限速步骤。因此,需要多次重复这个消除途径瓶颈的过程,以获得显著更高的琥珀酸滴度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d31e/7236211/611010ec20fe/13068_2020_1727_Fig1_HTML.jpg

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