Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, Gdansk, Poland.
Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
PLoS Comput Biol. 2020 Jun 1;16(6):e1007913. doi: 10.1371/journal.pcbi.1007913. eCollection 2020 Jun.
J-domain proteins (JDPs), obligatory Hsp70 cochaperones, play critical roles in protein homeostasis. They promote key allosteric transitions that stabilize Hsp70 interaction with substrate polypeptides upon hydrolysis of its bound ATP. Although a recent crystal structure revealed the physical mode of interaction between a J-domain and an Hsp70, the structural and dynamic consequences of J-domain action once bound and how Hsp70s discriminate among its multiple JDP partners remain enigmatic. We combined free energy simulations, biochemical assays and evolutionary analyses to address these issues. Our results indicate that the invariant aspartate of the J-domain perturbs a conserved intramolecular Hsp70 network of contacts that crosses domains. This perturbation leads to destabilization of the domain-domain interface-thereby promoting the allosteric transition that triggers ATP hydrolysis. While this mechanistic step is driven by conserved residues, evolutionarily variable residues are key to initial JDP/Hsp70 recognition-via electrostatic interactions between oppositely charged surfaces. We speculate that these variable residues allow an Hsp70 to discriminate amongst JDP partners, as many of them have coevolved. Together, our data points to a two-step mode of J-domain action, a recognition stage followed by a mechanistic stage.
J 结构域蛋白(JDPs)作为必需的 HSP70 共伴侣,在蛋白质平衡中发挥着关键作用。它们促进了关键的变构转变,在 HSP70 结合的 ATP 水解时稳定 HSP70 与底物多肽的相互作用。尽管最近的晶体结构揭示了 J 结构域与 HSP70 之间的物理相互作用模式,但 J 结构域结合后的结构和动态后果以及 HSP70 如何区分其多个 JDP 伴侣仍然是个谜。我们结合自由能模拟、生化测定和进化分析来解决这些问题。我们的结果表明,J 结构域中的不变天冬氨酸扰乱了跨越结构域的保守的 HSP70 分子内接触网络。这种扰动导致结构域-结构域界面的不稳定性,从而促进触发 ATP 水解的变构转变。虽然这个机制步骤是由保守残基驱动的,但进化上可变的残基是初始 JDP/HSP70 识别的关键——通过相反电荷表面之间的静电相互作用。我们推测这些可变残基允许 HSP70 区分 JDP 伴侣,因为它们中的许多是共同进化的。总之,我们的数据指向 J 结构域作用的两步模式,即识别阶段和机制阶段。