Buscher N, Ojeda A, Francoeur M, Hulyalkar S, Claros C, Tang T, Terry A, Gupta A, Fakhraei L, Ramanathan D S
Mental Health Service, VA San Diego Healthcare Syst., San Diego, CA 92161, United States; Dept. of Psychiatry, UC San Diego, La Jolla, CA 92093, United States.
Dept. of Psychiatry, UC San Diego, La Jolla, CA 92093, United States; Dept. of Electrical & Computer Engin., UC San Diego, La Jolla, CA 92093, United States.
J Neurosci Methods. 2020 Aug 1;342:108761. doi: 10.1016/j.jneumeth.2020.108761. Epub 2020 May 30.
Rodents have been used for decades to probe neural circuits involved in behavior. Increasingly, attempts have been developed to standardize training paradigms across labs; and to use visual/auditory paradigms that can be also tested in humans. Commercially available systems are expensive and thus do not scale easily, and are not optimized for electrophysiology.
Using the rich open-source technology built around Raspberry Pi, we were able to develop an inexpensive (<$1000) visual-screen based operant chamber with electrophysiological and optogenetic compatibility. The chamber is operated within MATLAB/Simulink, a commonly used scientific programming language allowing for rapid customization.
Here, we describe and provide all relevant details needed to develop and produce these chambers, and show examples of behavior and electrophysiology data collected using these chambers. We also include all of the tools needed to allow readers to build and develop their own boxes (CAD models for 3D printing and laser-cutting; PCB-board design; all bill of materials for required parts and supplies, and some examples of Simulink models to operate the boxes).
The new boxes are far more cost-effective than commercially available environments and allow for the combination of automated behavioral testing with electrophysiological read-outs with high temporal precision.
These open-source boxes can be used for labs interested in developing high-throughput visual/auditory behavioral assays for ∼ 10th the cost of commercial systems.
几十年来,啮齿动物一直被用于探究与行为相关的神经回路。人们越来越多地尝试在各实验室间规范训练范式,并使用也可在人类身上进行测试的视觉/听觉范式。市售系统价格昂贵,因此不易扩展,且未针对电生理学进行优化。
利用围绕树莓派构建的丰富开源技术,我们得以开发出一种价格低廉(低于1000美元)、具有电生理和光遗传学兼容性的基于视觉屏幕的操作性实验箱。该实验箱在MATLAB/Simulink中运行,MATLAB/Simulink是一种常用的科学编程语言,便于快速定制。
在此,我们描述并提供开发和制造这些实验箱所需的所有相关细节,并展示使用这些实验箱收集的行为和电生理数据示例。我们还提供了让读者构建和开发自己的实验箱所需的所有工具(用于3D打印和激光切割的CAD模型;印刷电路板设计;所需零件和用品的所有材料清单,以及一些操作实验箱的Simulink模型示例)。
新的实验箱比市售环境性价比高得多,并且能够将自动化行为测试与具有高时间精度的电生理读数相结合。
这些开源实验箱可用于那些有意开发高通量视觉/听觉行为测定法的实验室,成本约为商业系统的十分之一。