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活性质子传递网络的需求支持 CYP51 催化中的化合物 I 介导致密 C-C 键断裂。

A requirement for an active proton delivery network supports a compound I-mediated C-C bond cleavage in CYP51 catalysis.

机构信息

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.

Synchrotron Research Center, Life Science Collaborative Access Team, Northwestern University, Argonne, Illinois, USA.

出版信息

J Biol Chem. 2020 Jul 17;295(29):9998-10007. doi: 10.1074/jbc.RA120.014064. Epub 2020 Jun 3.

Abstract

CYP51 enzymes (sterol 14α-demethylases) are cytochromes P450 that catalyze multistep reactions. The CYP51 reaction occurs in all biological kingdoms and is essential in sterol biosynthesis. It removes the 14α-methyl group from cyclized sterol precursors by first forming an alcohol, then an aldehyde, and finally eliminating formic acid with the introduction of a Δ14-15 double bond in the sterol core. The first two steps are typical hydroxylations, mediated by an electrophilic compound I mechanism. The third step, C-C bond cleavage, has been proposed to involve either compound I ( FeO) or, alternatively, a proton transfer-independent nucleophilic ferric peroxo anion (compound 0, FeO). Here, using comparative crystallographic and biochemical analyses of WT human CYP51 (CYP51A1) and its D231A/H314A mutant, whose proton delivery network is destroyed (as evidenced in a 1.98-Å X-ray structure in complex with lanosterol), we demonstrate that deformylation of the 14α-carboxaldehyde intermediate requires an active proton relay network to drive the catalysis. These results indicate a unified, compound I-based mechanism for all three steps of the CYP51 reaction, as previously established for CYP11A1 and CYP19A1. We anticipate that our approach can be applied to mechanistic studies of other P450s that catalyze multistep reactions, such as C-C bond cleavage.

摘要

细胞色素 P450 51 酶(固醇 14α-脱甲基酶)是细胞色素 P450 家族的一员,能够催化多步反应。CYP51 反应发生在所有生物界,是固醇生物合成所必需的。它通过首先形成醇,然后形成醛,最后在固醇核心中引入 Δ14-15 双键来消除甲酸,从而从环化固醇前体中去除 14α-甲基。前两个步骤是典型的羟化反应,由亲电化合物 I 机制介导。第三步,C-C 键断裂,据推测涉及化合物 I(FeO)或质子转移无关的亲铁过氧阴离子(化合物 0,FeO)。在这里,我们使用 WT 人 CYP51(CYP51A1)及其 D231A/H314A 突变体的比较晶体学和生化分析,其质子传递网络被破坏(如与羊毛甾醇复合物的 1.98-Å X 射线结构所示),我们证明了 14α-羧醛中间物的去甲酰化需要一个活跃的质子传递网络来驱动催化。这些结果表明,CYP51 反应的所有三个步骤都采用统一的、基于化合物 I 的机制,如先前在 CYP11A1 和 CYP19A1 中建立的那样。我们预计我们的方法可以应用于其他催化多步反应的 P450 如 C-C 键断裂的机制研究。

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