Wesevich Austin, Sutton Granger, Ruffin Felicia, Park Lawrence P, Fouts Derrick E, Fowler Vance G, Thaden Joshua T
Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
Department of Pediatrics, Duke University School of Medicine, Durham, North Carolina, USA.
J Clin Microbiol. 2020 Aug 24;58(9). doi: 10.1128/JCM.00582-20.
was recently renamed This study aimed to identify differences in clinical characteristics, outcomes, and bacterial genetics among patients with versus species bloodstream infections (BSI). We prospectively enrolled patients with or complex () BSI from 2002 to 2015. We performed whole-genome sequencing (WGS) and pan-genome analysis on all bacteria. Overall, 150 patients with (46/150 [31%]) or (104/150 [69%]) BSI were enrolled. The two groups had similar baseline characteristics. Neither total in-hospital mortality (13/46 [28%] versus 22/104 [21%]; = 0.3) nor attributable in-hospital mortality (9/46 [20%] versus 13/104 [12%]; = 0.3) differed between patients with versus BSI, respectively. However, poor clinical outcome (death before discharge, recurrent BSI, and/or BSI complication) was higher for than BSI (32/46 [70%] versus 42/104 [40%]; = 0.001). In a multivariable regression model, BSI, relative to BSI, was predictive of poor clinical outcome (odds ratio 3.3; 95% confidence interval 1.4 to 8.1; = 0.008). Pan-genome analysis revealed 983 genes in 323 genomic islands unique to isolates, including putative virulence genes involved in iron acquisition ( = 67), fimbriae/pili/flagella production ( = 117), and metal homeostasis ( = 34). Antibiotic resistance was largely found in lineage 1, which had a higher rate of multidrug resistant phenotype (23/54 [43%]) relative to all other bacterial isolates (23/96 [24%]; = 0.03). BSI was associated with poor clinical outcomes relative to BSI. Putative virulence factors in may account for these differences.
最近被重新命名。本研究旨在确定[具体菌种1]与[具体菌种2]血流感染(BSI)患者在临床特征、结局和细菌遗传学方面的差异。我们前瞻性地纳入了2002年至2015年患有[具体菌种1]或[具体菌种2]复杂性([具体情况])BSI的患者。我们对所有细菌进行了全基因组测序(WGS)和泛基因组分析。总体而言,纳入了150例患有[具体菌种1](46/150 [31%])或[具体菌种2](104/150 [69%])BSI的患者。两组的基线特征相似。[具体菌种1]与[具体菌种2]BSI患者的院内总死亡率(13/46 [28%] 对 22/104 [21%];P = 0.3)和归因院内死亡率(9/46 [20%] 对 13/104 [12%];P = 0.3)均无差异。然而,[具体菌种1]BSI患者的不良临床结局(出院前死亡、复发性BSI和/或BSI并发症)高于[具体菌种2]BSI患者(32/46 [70%] 对 42/104 [40%];P = 0.001)。在多变量回归模型中,相对于[具体菌种2]BSI,[具体菌种1]BSI可预测不良临床结局(比值比3.3;95%置信区间1.4至8.1;P = 0.008)。泛基因组分析揭示了[具体菌种1]分离株特有的323个基因组岛中的983个基因,包括参与铁获取(n = 67)、菌毛/菌毛/鞭毛产生(n = 117)和金属稳态(n = 34)的假定毒力基因。抗生素耐药性主要在[具体菌种1]谱系1中发现,其多重耐药表型的发生率(23/54 [43%])高于所有其他细菌分离株(23/96 [24%];P = 0.03)。相对于[具体菌种2]BSI,[具体菌种1]BSI与不良临床结局相关。[具体菌种1]中的假定毒力因子可能解释了这些差异。