Vaccine and Infectious Disease Organization - International Vaccine Centre, University of Saskatchewan, Saskatoon, SK, Canada.
Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada.
Front Immunol. 2020 May 15;11:765. doi: 10.3389/fimmu.2020.00765. eCollection 2020.
Within human health research, the remarkable utility of kinase inhibitors as therapeutics has motivated efforts to understand biology at the level of global cellular kinase activity (the kinome). In contrast, the diminished potential for using kinase inhibitors in food animals has dampened efforts to translate this research approach to livestock species. This, in our opinion, was a lost opportunity for livestock researchers given the unique potential of kinome analysis to offer insight into complex biology. To remedy this situation, our lab developed user-friendly, cost-effective approaches for kinome analysis that can be readily incorporated into most research programs but with a specific priority to enable the technology to livestock researchers. These contributions include the development of custom software programs for the creation of species-specific kinome arrays as well as comprehensive deconvolution and analysis of kinome array data. Presented in this review are examples of the application of kinome analysis to highlight the utility of the technology to further our understanding of two key complex biological events of priority to the livestock industry: host immune responses to infectious diseases and animal stress responses. These advances and examples of application aim to provide both mechanisms and motivation for researchers, particularly livestock researchers, to incorporate kinome analysis into their research programs.
在人类健康研究中,激酶抑制剂作为治疗药物的显著效用促使人们努力从全球细胞激酶活性(激酶组)水平理解生物学。相比之下,将这种研究方法应用于畜牧物种的潜力降低,抑制了人们的积极性。在我们看来,这对于畜牧研究人员来说是一个错失的机会,因为激酶组分析具有深入了解复杂生物学的独特潜力。为了弥补这种情况,我们的实验室开发了用户友好、具有成本效益的激酶组分析方法,这些方法可以很容易地纳入大多数研究计划,但有一个特定的优先事项,即为畜牧研究人员启用该技术。这些贡献包括开发用于创建物种特异性激酶组阵列的定制软件程序,以及对激酶组阵列数据进行全面的反卷积和分析。本文介绍了激酶组分析的应用实例,以突出该技术在深入了解畜牧行业优先考虑的两个关键复杂生物学事件方面的效用:宿主对传染病的免疫反应和动物应激反应。这些进展和应用实例旨在为研究人员,特别是畜牧研究人员提供将激酶组分析纳入其研究计划的机制和动力。