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无标度生物学:整合进化与发育思维

Scale-Free Biology: Integrating Evolutionary and Developmental Thinking.

作者信息

Fields Chris, Levin Michael

机构信息

23 Rue des Lavandieres, 11160 Caunes Minervois, France.

Allen Discovery Center at Tufts University, Medford, MA, 02155, USA.

出版信息

Bioessays. 2020 Aug;42(8):e1900228. doi: 10.1002/bies.201900228. Epub 2020 Jun 14.

Abstract

When the history of life on earth is viewed as a history of cell division, all of life becomes a single cell lineage. The growth and differentiation of this lineage in reciprocal interaction with its environment can be viewed as a developmental process; hence the evolution of life on earth can also be seen as the development of life on earth. Here, in reviewing this field, some potentially fruitful research directions suggested by this change in perspective are highlighted. Variation and selection become, for example, bidirectional information flows between scales, while the notions of "cooperation" and "competition" become scale relative. The language of communication, inference, and information processing becomes more useful than the language of causation to describe the interactions of both homogeneous and heterogeneous living systems at any scale. Emerging scale-free theoretical frameworks such as predictive coding and active inference provide conceptual tools for reconceptualizing biology as the study of a unified, multiscale dynamical system.

摘要

当把地球上生命的历史视为细胞分裂的历史时,所有生命都成为了单一的细胞谱系。这个谱系在与其环境的相互作用中的生长和分化可被视为一个发育过程;因此,地球上生命的进化也可被看作是地球上生命的发展。在此,在回顾这一领域时,强调了这种视角转变所暗示的一些可能富有成果的研究方向。例如,变异和选择成为了不同尺度之间的双向信息流,而“合作”和“竞争”的概念则变得与尺度相关。通信、推理和信息处理的语言在描述任何尺度上的同质性和异质性生命系统的相互作用时,比因果关系的语言更有用。诸如预测编码和主动推理等新兴的无标度理论框架为将生物学重新概念化为对一个统一的多尺度动力系统的研究提供了概念工具。

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