Conrad Ralf
Max-Planck-Institute for Terrestrial Microbiology, Karl-von-Frisch-Str. 10, 35043 Marburg, Germany.
Microorganisms. 2020 Jun 11;8(6):881. doi: 10.3390/microorganisms8060881.
Flooding and desiccation of soil environments mainly affect the availability of water and oxygen. While water is necessary for all life, oxygen is required for aerobic microorganisms. In the absence of O, anaerobic processes such as CH production prevail. There is a substantial theoretical knowledge of the biogeochemistry and microbiology of processes in the absence of O. Noteworthy are processes involved in the sequential degradation of organic matter coupled with the sequential reduction of electron acceptors, and, finally, the formation of CH. These processes follow basic thermodynamic and kinetic principles, but also require the presence of microorganisms as catalysts. Meanwhile, there is a lot of empirical data that combines the observation of process function with the structure of microbial communities. While most of these observations confirmed existing theoretical knowledge, some resulted in new information. One important example was the observation that methanogens, which have been believed to be strictly anaerobic, can tolerate O to quite some extent and thus survive desiccation of flooded soil environments amazingly well. Another example is the strong indication of the importance of redox-active soil organic carbon compounds, which may affect the rates and pathways of CH production. It is noteworthy that drainage and aeration turns flooded soils, not generally, into sinks for atmospheric CH, probably due to the peculiarities of the resident methanotrophic bacteria.
土壤环境的淹水和干燥主要影响水和氧气的有效性。虽然水是所有生命所必需的,但需氧微生物需要氧气。在没有氧气的情况下,诸如甲烷生成等厌氧过程占主导地位。对于无氧条件下过程的生物地球化学和微生物学,有大量的理论知识。值得注意的是,涉及有机物顺序降解以及电子受体顺序还原,最终形成甲烷的过程。这些过程遵循基本的热力学和动力学原理,但也需要微生物作为催化剂的存在。同时,有许多经验数据将过程功能的观察与微生物群落结构相结合。虽然这些观察大多证实了现有的理论知识,但有些得出了新的信息。一个重要的例子是观察到,一直被认为严格厌氧的产甲烷菌能够在相当程度上耐受氧气,并因此在淹水土壤环境干燥时惊人地存活下来。另一个例子是有力地表明了氧化还原活性土壤有机碳化合物的重要性,其可能影响甲烷生成的速率和途径。值得注意的是,排水和通气通常不会使淹水土壤成为大气甲烷的汇,这可能是由于常驻甲烷氧化细菌的特性所致。