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使用MinION和Illumina MiSeq测序获得的8株野生鸟类分离株的封闭基因组序列及抗菌药物耐药谱

Closed Genome Sequences and Antimicrobial Resistance Profiles of Eight Wild Bird Isolates Obtained with MinION and Illumina MiSeq Sequencing.

作者信息

Naushad Sohail, Duceppe Marc-Olivier, Dupras Andrée Ann, Gao Ruimin, Ogunremi Dele

机构信息

Ottawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, Ontario, Canada

Ottawa Laboratory Fallowfield, Canadian Food Inspection Agency, Ottawa, Ontario, Canada.

出版信息

Microbiol Resour Announc. 2020 Jun 18;9(25):e00228-20. doi: 10.1128/MRA.00228-20.

DOI:10.1128/MRA.00228-20
PMID:32554786
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7303406/
Abstract

Complete genome sequences of eight isolates of subsp. from Canadian wild birds were determined by MinION and Illumina MiSeq sequencing. Assembled chromosomes had an average size of 4,833,662 bp. serovar Worthington obtained from partridge and quail carried 267-kb plasmids, which contained multiple antimicrobial resistance genes.

摘要

通过MinION和Illumina MiSeq测序确定了来自加拿大野生鸟类的8株亚种的完整基因组序列。组装后的染色体平均大小为4,833,662 bp。从鹧鸪和鹌鹑中获得的血清型沃辛顿携带267 kb的质粒,其中包含多个抗微生物耐药基因。

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本文引用的文献

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Genome Sequences of 13 Isolates of Salmonella enterica Serovar Typhimurium var. Copenhagen Obtained from Wild Pigeons in Canada.从加拿大野生鸽子中分离出的13株肠炎沙门氏菌哥本哈根变种的基因组序列
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