从鸡粪中分离出的产细菌素菌株B19的全基因组序列。
Complete genome sequence of B19, a strain producing bacteriocin, isolated from chicken feces.
作者信息
Lee Ju-Eun, Heo Sunhak, Kim Geun-Bae
机构信息
Department of Animal Science and Technology, Chung-Ang University, Anseong 17546, Korea.
出版信息
J Anim Sci Technol. 2020 May;62(3):420-422. doi: 10.5187/jast.2020.62.3.420. Epub 2020 May 31.
B19 was isolated from chicken feces collected from local farm in Anseong, Korea. B19 was shown to produce bacteriocin-like compounds exhibiting inhibitory activities against several pathogens including strains of and . The whole genome of B19 strain was sequenced using PacBio RS II platform. The genome comprised four contigs with a size of 2,217,061 bp. The DNA G + C content was found to be 42.95 mol%. Annotation results revealed 2,266 coding sequences (CDSs), 18 rRNAs, and 61 tRNA genes. Based on genome analysis, we found that the strain B19 possessed various genes associated with bacteriocin synthesis, modification, and transport.
B19是从韩国安城当地农场采集的鸡粪便中分离出来的。B19被证明能产生类似细菌素的化合物，对包括……菌株在内的几种病原体具有抑制活性。使用PacBio RS II平台对B19菌株的全基因组进行了测序。该基因组由四个重叠群组成，大小为2,217,061 bp。发现DNA的G + C含量为42.95 mol%。注释结果显示有2,266个编码序列（CDS）、18个rRNA和61个tRNA基因。基于基因组分析，我们发现B19菌株拥有与细菌素合成、修饰和转运相关的各种基因。
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