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低紫外线-C胁迫通过涉及新信号分子和效应物的蛋白质组学和代谢组学变化来调节生物量组成和氧化应激反应。

Low UV-C stress modulates biomass composition and oxidative stress response through proteomic and metabolomic changes involving novel signalers and effectors.

作者信息

Colina Francisco, Carbó María, Meijón Mónica, Cañal María Jesús, Valledor Luis

机构信息

Plant Physiology, Department of Organisms and Systems Biology and University Institute of Biotechnology of Asturias (IUBA), University of Oviedo, Oviedo, Spain.

出版信息

Biotechnol Biofuels. 2020 Jun 19;13:110. doi: 10.1186/s13068-020-01750-8. eCollection 2020.

DOI:10.1186/s13068-020-01750-8
PMID:32577129
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7305600/
Abstract

BACKGROUND

The exposure of microalgae and plants to low UV-C radiation dosages can improve their biomass composition and stress tolerance. Despite UV-C sharing these effects with UV-A/B but at much lower dosages, UV-C sensing and signal mechanisms are still mostly unknown. Thus, we have described and integrated the proteometabolomic and physiological changes occurring in -a simple Plantae model-into the first 24 h after a short and low-intensity UV-C irradiation in order to reconstruct the microalgae response system to this stress.

RESULTS

The microalgae response was characterized by increased redox homeostasis, ROS scavenging and protein damage repair/avoidance elements. These processes were upregulated along with others related to the modulation of photosynthetic electron flux, carbon fixation and C/N metabolism. These changes, attributed to either direct UV-C-, ROS- or redox unbalances-associated damage, trigger a response process involving novel signaling intermediaries and effectors such as the translation modulator FAP204, a PP2A-like protein and a novel DYRK kinase. These elements were found linked to the modulation of Chlamydomonas biomass composition (starch accumulation) and proliferation, within an UV-C response probably modulated by different epigenetic factors.

CONCLUSION

Chosen multiomics integration approach was able to describe many fast changes, including biomass composition and ROS stress tolerance, as a response to a low-intensity UV-C stress. Moreover, the employed omics and systems biology approach placed many previously unidentified protein and metabolites at the center of these changes. These elements would be promising targets for the characterization of this stress response in microalgae and plants and the engineering of more productive microalgae strains.

摘要

背景

微藻和植物暴露于低剂量的UV-C辐射下可改善其生物质组成并提高胁迫耐受性。尽管UV-C与UV-A/B具有这些相同效应,但所需剂量要低得多,然而UV-C的感知和信号机制仍大多未知。因此,我们描述并整合了在简单植物模型中,短时间低强度UV-C照射后最初24小时内发生的蛋白质代谢组学和生理变化,以重建微藻对这种胁迫的响应系统。

结果

微藻的响应特征是氧化还原稳态增加、ROS清除以及蛋白质损伤修复/避免元素增加。这些过程与其他与光合电子通量调节、碳固定和碳/氮代谢相关的过程一起上调。这些变化归因于直接的UV-C、ROS或氧化还原失衡相关的损伤,触发了一个涉及新型信号中间体和效应器的响应过程,如翻译调节因子FAP204、一种类PP2A蛋白和一种新型DYRK激酶。在可能由不同表观遗传因素调节的UV-C响应中,发现这些元素与衣藻生物质组成(淀粉积累)和增殖的调节有关。

结论

所选择的多组学整合方法能够描述许多快速变化,包括生物质组成和ROS胁迫耐受性,作为对低强度UV-C胁迫的响应。此外,所采用的组学和系统生物学方法将许多先前未鉴定的蛋白质和代谢物置于这些变化的核心位置。这些元素有望成为表征微藻和植物中这种胁迫响应以及改造更高产微藻菌株的目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/7432349aa404/13068_2020_1750_Fig7_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/e4a09d82ddd6/13068_2020_1750_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/7432349aa404/13068_2020_1750_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/e20bd24fb4fd/13068_2020_1750_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/8ea1f0b5133e/13068_2020_1750_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/c8f8a84cfcb5/13068_2020_1750_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/cd97f3b449ca/13068_2020_1750_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/5f1e71763915/13068_2020_1750_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/e4a09d82ddd6/13068_2020_1750_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c033/7305600/7432349aa404/13068_2020_1750_Fig7_HTML.jpg

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