• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用电子断层成像术实现高通量原位结构生物学研究。

Towards high-throughput in situ structural biology using electron cryotomography.

机构信息

Sir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, United Kingdom; Central Oxford Structural Microscopy and Imaging Centre, South Parks Road, Oxford OX1 3RE, United Kingdom.

Sir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, United Kingdom; Central Oxford Structural Microscopy and Imaging Centre, South Parks Road, Oxford OX1 3RE, United Kingdom.

出版信息

Prog Biophys Mol Biol. 2021 Mar;160:97-103. doi: 10.1016/j.pbiomolbio.2020.05.010. Epub 2020 Jun 21.

DOI:10.1016/j.pbiomolbio.2020.05.010
PMID:32579969
Abstract

Electron cryotomography is a rapidly evolving method for imaging macromolecules directly within the native environment of cells and tissues. Combined with sub-tomogram averaging, it allows structural and cell biologists to obtain sub-nanometre resolution structures in situ. However, low throughput in cryo-ET sample preparation and data acquisition, as well as difficulties in target localisation and sub-tomogram averaging image processing, limit its widespread usability. In this review, we discuss new advances in the field that address these throughput and technical problems. We focus on recent efforts made to resolve issues in sample thinning, improvement in data collection speed at the microscope, strategies for localisation of macromolecules using correlated light and electron microscopy and advancements made to improve resolution in sub-tomogram averaging. These advances will considerably decrease the amount of time and effort required for cryo-ET and sub-tomogram averaging, ushering in a new era of structural biology where in situ macromolecular structure determination will be routine.

摘要

电子晶体学断层扫描是一种快速发展的方法,可直接在细胞和组织的天然环境中对大分子进行成像。与亚断层平均法相结合,它使结构和细胞生物学家能够原位获得亚纳米分辨率的结构。然而,低温电子断层扫描样品制备和数据采集的低通量,以及目标定位和亚断层平均图像处理的困难,限制了它的广泛应用。在这篇综述中,我们讨论了该领域解决这些通量和技术问题的新进展。我们专注于最近在解决样品变薄、显微镜数据收集速度提高、利用相关光和电子显微镜对大分子进行定位的策略以及提高亚断层平均分辨率方面的努力。这些进展将大大减少低温电子断层扫描和亚断层平均所需的时间和精力,迎来结构生物学的新时代,届时原位测定大分子结构将成为常规。

相似文献

1
Towards high-throughput in situ structural biology using electron cryotomography.利用电子断层成像术实现高通量原位结构生物学研究。
Prog Biophys Mol Biol. 2021 Mar;160:97-103. doi: 10.1016/j.pbiomolbio.2020.05.010. Epub 2020 Jun 21.
2
Advances in Single-Particle Electron Cryomicroscopy Structure Determination applied to Sub-tomogram Averaging.单颗粒电子冷冻显微镜结构测定在亚断层平均法中的进展
Structure. 2015 Sep 1;23(9):1743-1753. doi: 10.1016/j.str.2015.06.026. Epub 2015 Aug 6.
3
Locating macromolecules and determining structures inside bacterial cells using electron cryotomography.利用电子晶体学断层扫描技术定位细菌细胞内的大分子并确定其结构。
Biochim Biophys Acta Proteins Proteom. 2018 Sep;1866(9):973-981. doi: 10.1016/j.bbapap.2018.06.003. Epub 2018 Jun 13.
4
Determination of protein structure at 8.5Å resolution using cryo-electron tomography and sub-tomogram averaging.使用冷冻电镜断层成像和亚断层平均法测定 8.5Å 分辨率下的蛋白质结构。
J Struct Biol. 2013 Dec;184(3):394-400. doi: 10.1016/j.jsb.2013.10.015. Epub 2013 Oct 30.
5
Compressed sensing for electron cryotomography and high-resolution subtomogram averaging of biological specimens.压缩感知在电子晶体学和生物标本的高分辨率子断层平均中的应用。
Structure. 2022 Mar 3;30(3):408-417.e4. doi: 10.1016/j.str.2021.12.010. Epub 2022 Jan 19.
6
Using Tomoauto: A Protocol for High-throughput Automated Cryo-electron Tomography.使用Tomoauto:一种高通量自动冷冻电子断层扫描协议。
J Vis Exp. 2016 Jan 30(107):e53608. doi: 10.3791/53608.
7
In Situ Cryo-Electron Tomography: A Post-Reductionist Approach to Structural Biology.原位冷冻电子断层扫描:结构生物学的一种后还原论方法。
J Mol Biol. 2016 Jan 29;428(2 Pt A):332-343. doi: 10.1016/j.jmb.2015.09.030. Epub 2015 Oct 9.
8
Cryo-Electron Tomography and Subtomogram Averaging.冷冻电子断层扫描与亚断层平均法
Methods Enzymol. 2016;579:329-67. doi: 10.1016/bs.mie.2016.04.014. Epub 2016 Jun 22.
9
Streamlined structure determination by cryo-electron tomography and subtomogram averaging using TomoBEAR.利用 TomoBEAR 通过冷冻电子断层扫描和子断层平均化实现结构的简化测定。
Nat Commun. 2023 Oct 17;14(1):6543. doi: 10.1038/s41467-023-42085-w.
10
Multishot tomography for high-resolution in situ subtomogram averaging.用于高分辨率原位亚断层平均的多帧断层扫描。
J Struct Biol. 2023 Mar;215(1):107911. doi: 10.1016/j.jsb.2022.107911. Epub 2022 Nov 4.

引用本文的文献

1
A new age in structural S-layer biology: Experimental and in silico milestones.结构表层生物学的新时代:实验与计算机模拟的里程碑。
J Biol Chem. 2025 May 8;301(6):110205. doi: 10.1016/j.jbc.2025.110205.
2
Structural biology inside multicellular specimens using electron cryotomography.利用电子冷冻断层扫描技术研究多细胞标本内部的结构生物学。
Q Rev Biophys. 2025 Jan 13;58:e6. doi: 10.1017/S0033583525000010.
3
Serial lift-out for in situ structural biology of multicellular specimens.用于多细胞标本原位结构生物学的连续剥离法
Nat Methods. 2024 Sep;21(9):1587-1588. doi: 10.1038/s41592-024-02317-3.
4
The advent of preventive high-resolution structural histopathology by artificial-intelligence-powered cryogenic electron tomography.通过人工智能驱动的低温电子断层扫描实现预防性高分辨率结构组织病理学的出现。
Front Mol Biosci. 2024 May 29;11:1390858. doi: 10.3389/fmolb.2024.1390858. eCollection 2024.
5
Optimize Electron Beam Energy toward In Situ Imaging of Thick Frozen Bio-Samples with Nanometer Resolution Using MeV-STEM.利用兆电子伏特扫描透射电子显微镜(MeV-STEM)优化电子束能量,以实现对厚冷冻生物样本的纳米级原位成像。
Nanomaterials (Basel). 2024 May 5;14(9):803. doi: 10.3390/nano14090803.
6
The application and development of electron microscopy for three-dimensional reconstruction in life science: a review.电子显微镜在生命科学中三维重构的应用与发展:综述。
Cell Tissue Res. 2024 Apr;396(1):1-18. doi: 10.1007/s00441-024-03878-7. Epub 2024 Feb 28.
7
High-Throughput Identification of Crystalline Natural Products from Crude Extracts Enabled by Microarray Technology and microED.通过微阵列技术和微电子衍射实现的粗提物中结晶天然产物的高通量鉴定
ACS Cent Sci. 2023 Dec 20;10(1):176-183. doi: 10.1021/acscentsci.3c01365. eCollection 2024 Jan 24.
8
Charting the molecular landscape of the cell.绘制细胞的分子图谱。
Structure. 2023 Nov 2;31(11):1297-1305. doi: 10.1016/j.str.2023.08.015. Epub 2023 Sep 11.
9
Volume EM: a quiet revolution takes shape.卷 EM:悄然兴起的一场革命。
Nat Methods. 2023 Jun;20(6):777-782. doi: 10.1038/s41592-023-01861-8.
10
Interdigitated immunoglobulin arrays form the hyperstable surface layer of the extremophilic bacterium .指状免疫球蛋白阵列构成了极端嗜热菌超稳定的表面层。
Proc Natl Acad Sci U S A. 2023 Apr 18;120(16):e2215808120. doi: 10.1073/pnas.2215808120. Epub 2023 Apr 12.