Oury Nicolas, Gélin Pauline, Magalon Hélène
UMR ENTROPIE (Université de La Réunion, IRD, CNRS) Université de La Réunion St Denis, La Réunion France.
Laboratoire d'Excellence CORAIL Perpignan France.
Ecol Evol. 2020 Jun 5;10(12):5208-5218. doi: 10.1002/ece3.5807. eCollection 2020 Jun.
We investigated the occurrence of intracolonial genetic variability (IGV) in corals in the southwestern Indian Ocean. Ninety-six colonies were threefold-sampled from three sites in Reunion Island. Nubbins were genotyped using 13 microsatellite loci, and their multilocus genotypes compared. Over 50% of the colonies presented at least two different genotypes among their three nubbins, and IGV was found abundant in all sites (from 36.7% to 58.1%). To define the threshold distinguishing mosaicism from chimerism, we developed a new method based on different evolution models by computing the number of different alleles for the infinite allele model (IAM) and the Bruvo's distance for the stepwise mutation model (SMM). Colonies were considered as chimeras if their nubbins differed from more than four alleles and if the pairwise Bruvo's distance was higher than 0.12. Thus 80% of the IGV colonies were mosaics and 20% chimeras (representing almost 10% of the total sampling). IGV seems widespread in scleractinians and beyond the disabilities of this phenomenon reported in several studies, it should also bring benefits. Next steps are to identify these benefits and to understand processes leading to IGV, as well as factors influencing them.
我们研究了印度洋西南部珊瑚群体内的遗传变异性(IGV)。从留尼汪岛的三个地点对96个珊瑚群体进行了三次采样。利用13个微卫星位点对珊瑚断枝进行基因分型,并比较它们的多位点基因型。超过50%的珊瑚群体在其三段珊瑚断枝中呈现出至少两种不同的基因型,并且在所有地点都发现了丰富的IGV(从36.7%到58.1%)。为了定义区分镶嵌性和嵌合性的阈值,我们基于不同的进化模型开发了一种新方法,通过计算无限等位基因模型(IAM)的不同等位基因数量和逐步突变模型(SMM)的布鲁沃距离。如果珊瑚群体的珊瑚断枝与超过四个等位基因不同,并且成对的布鲁沃距离高于0.12,则将其视为嵌合体。因此,80%的IGV群体是镶嵌体,20%是嵌合体(占总采样的近10%)。IGV似乎在石珊瑚中广泛存在,并且除了几项研究中报道的这种现象的不利影响之外,它也应该带来益处。接下来的步骤是确定这些益处,并了解导致IGV的过程以及影响它们的因素。