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法老小家蚁大脑的染色质可及性和转录组图谱。

Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain.

机构信息

BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, 518083, China.

BGI-Shenzhen, Shenzhen, 518083, China.

出版信息

Sci Data. 2020 Jul 8;7(1):217. doi: 10.1038/s41597-020-0556-x.

Abstract

The emergence of social organization (eusociality) is a major event in insect evolution. Although previous studies have investigated the mechanisms underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing sociality in these insects remain obscure. In this study, we profiled the transcriptome and chromatin accessibility of brain tissues in three Monomorium pharaonis ant castes: queens (including mature and un-mated queens), males and workers. We provide a comprehensive dataset including 16 RNA-sequencing and 16 assay for transposase accessible chromatin (ATAC)-sequencing profiles. We also demonstrate strong reproducibility of the datasets and have identified specific genes and open chromatin regions in the genome that may be associated with the social function of these castes. Our data will be a valuable resource for further studies of insect behaviour, particularly the role of brain in the control of eusociality.

摘要

社会组织(真社会性)的出现是昆虫进化中的一个重大事件。尽管先前的研究已经调查了包括蚂蚁和蜜蜂在内的真社会性昆虫的分工分化和社会行为的机制,但这些昆虫的社会性的分子电路仍然不清楚。在这项研究中,我们对三种法老小家蚁(Monomorium pharaonis)蚁群的脑组织进行了转录组和染色质可及性分析:蚁后(包括成熟和未交配的蚁后)、雄蚁和工蚁。我们提供了一个包括 16 个 RNA-seq 和 16 个转座酶可及染色质(ATAC-seq)分析图谱的综合数据集。我们还证明了数据集的强重现性,并在基因组中鉴定了可能与这些蚁群社会功能相关的特定基因和开放染色质区域。我们的数据将成为进一步研究昆虫行为的有价值的资源,特别是大脑在控制真社会性方面的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da08/7343836/ef86e85cea33/41597_2020_556_Fig1_HTML.jpg

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