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黑海和土耳其海峡系统短吻海豚的群体遗传结构。

Population genetic structure of the short-beaked common dolphin from the Black Sea and the Turkish Straits System.

机构信息

Faculty of Aquatic Sciences, Istanbul University, Istanbul, Turkey.

Turkish Marine Research Foundation (TUDAV), Istanbul, Turkey.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2020 Aug;31(6):257-264. doi: 10.1080/24701394.2020.1788008. Epub 2020 Jul 11.

DOI:10.1080/24701394.2020.1788008
PMID:32654598
Abstract

Our study aims to assess the population connectivity, evolutionary history, and conservation status of the short-beaked common dolphin in the Black Sea and Turkish Straits System (TSS). We also include DNA sequences from the Atlantic Ocean and the Mediterranean Sea to provide a regional perspective to our localized study. Analysis of 366 base pairs of mitochondrial DNA D-loop fragments from 37 samples collected from short-beaked common dolphins in the Black Sea, TSS, and Aegean Sea revealed 13 haplotypes, eight of which have not been previously reported. While analysis of samples archived on GenBank revealed 89 different haplotypes across the region. The haplotype network contains two main peripheral groups that include individuals from all locations. Haplotypes from the Atlantic Ocean are scattered across the network and no obvious population separation was detected. Some shared haplotypes potentially indicate multi-directional colonization events of the Mediterranean Sea from the eastern Atlantic Ocean. Moreover, some less widely distributed haplotypes suggest some level of more recent genetic connectivity through the Strait of Gibraltar and the TSS and point out the importance of these straits in the dispersal of short-beaked common dolphins. The haplotype and nucleotide diversity values were lower in the Black Sea, TSS, and western Mediterranean Sea when compared to the Atlantic Ocean, supporting the expansion of Atlantic populations into the Mediterranean and the Black Seas. Differentiation was observed between the Atlantic Ocean, and the Mediterranean Sea, TSS and the Black Sea based on Фst but not between Mediterranean and the Black Seas. For common dolphins, which have high dispersal potential, the protection of open seas and narrow seaways to enhance connectivity may be crucial.

摘要

本研究旨在评估黑海和土耳其海峡系统(TSS)中短吻海豚的种群连通性、进化历史和保护状况。我们还包括了来自大西洋和地中海的 DNA 序列,为我们的局部研究提供了区域视角。对从黑海、TSS 和爱琴海采集的 37 个短吻海豚样本的 366 个碱基对的线粒体 DNA D 环片段进行分析,揭示了 13 个单倍型,其中 8 个以前没有报道过。而对 GenBank 中存档样本的分析显示,整个区域有 89 个不同的单倍型。单倍型网络包含两个主要的外围群体,其中包括来自所有地点的个体。来自大西洋的单倍型散布在网络中,没有检测到明显的种群分离。一些共享的单倍型可能表明地中海从东大西洋有多次的殖民化事件。此外,一些分布较少的单倍型表明,通过直布罗陀海峡和 TSS 存在一定程度的最近遗传连通性,这突显了这些海峡在短吻海豚扩散中的重要性。与大西洋相比,黑海、TSS 和西地中海的单倍型和核苷酸多样性值较低,支持大西洋种群向地中海和黑海的扩张。基于 Фst,大西洋、地中海、TSS 和黑海之间存在分化,但地中海和黑海之间不存在分化。对于具有高扩散潜力的普通海豚来说,保护开阔海域和狭窄海峡以增强连通性可能至关重要。

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