Madabeni Andrea, Dalla Tiezza Marco, Omage Folorunsho Bright, Nogara Pablo Andrei, Bortoli Marco, Rocha João Batista Teixeira, Orian Laura
Dipartimento di Scienze Chimiche, Università Degli Studi di Padova, Padova, Italy.
Departamento de Bioquímica e Biologia Molecular, Universidade Federal de Santa Maria, Santa Maria, Rio Grande do Sul, Brazil.
J Comput Chem. 2020 Sep 5;41(23):2045-2054. doi: 10.1002/jcc.26371. Epub 2020 Jul 13.
Methylmercury is a highly toxic compound and human exposure is mainly related to consumption of polluted fish and seafood. The inactivation of thiol-based enzymes, promoted by the strong affinity binding of electrophilic mercuric ions to thiol and selenol groups of proteins, is likely an important factor explaining its toxicity. A key role is played by the chemistry and reactivity of the mercury-chalcogens bond, particularly HgS and HgSe, which is the focus of this computational work (level of theory: (COSMO)-ZORA-BLYP-D3(BJ)/TZ2P). We analyze nine ligand-exchange model reactions (the so-called Rabenstein's reactions) involving an entering ligand (methylchalcogenolate) and a substrate (methylchalcogenolatemethylmercury). Trends in reaction and activation energies are discussed and a change in mechanism is reported for all cases when going from gas phase to water, that is, from a single-well potential energy surface (PES) to a canonical S 2-like mechanism. The reasons accounting for the biochemically challenging and desired displacement of methylmercury from a seleno/thiol protein can be found already in these model reactions, as can be seen from the similarities of the ligand exchange reactions in solution in thermodynamics and kinetics.
甲基汞是一种剧毒化合物,人类接触主要与食用受污染的鱼类和海鲜有关。亲电汞离子与蛋白质的硫醇和硒醇基团的强亲和力结合促进了基于硫醇的酶的失活,这可能是解释其毒性的一个重要因素。汞-硫属元素键,特别是HgS和HgSe的化学性质和反应活性起着关键作用,这是本计算工作的重点(理论水平:(COSMO)-ZORA-BLYP-D3(BJ)/TZ2P)。我们分析了九个配体交换模型反应(所谓的拉本斯坦反应),涉及一个进入的配体(甲基硫属元素醇盐)和一个底物(甲基硫属元素醇盐甲基汞)。讨论了反应和活化能的趋势,并报告了从气相到水时所有情况下的机理变化,即从单阱势能面(PES)到典型的类似S 2的机理。从这些模型反应中已经可以找到解释从硒/硫醇蛋白中生物化学上具有挑战性且期望的甲基汞置换的原因,从溶液中配体交换反应在热力学和动力学上的相似性中也可以看出。