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福尔马林固定石蜡包埋组织的RNA测序作为眼科病理学的一种补充方法

RNA Sequencing of Formalin-Fixed and Paraffin-Embedded Tissue as a Complementary Method in Ophthalmopathology.

作者信息

Schlunck Günther, Boneva Stefaniya, Wolf Julian, Schlecht Anja, Reinhard Thomas, Auw-Hädrich Claudia, Lange Clemens

机构信息

Klinik für Augenheilkunde, Universitätsklinikum Freiburg, Medizinische Fakultät, Albert-Ludwigs Universität Freiburg.

出版信息

Klin Monbl Augenheilkd. 2020 Jul;237(7):860-866. doi: 10.1055/a-1187-1590. Epub 2020 Jul 13.

Abstract

The high-throughput method of "Next Generation Sequencing" (NGS) allows cost-effective decoding of the nucleotide sequences of millions of RNA molecules in a sample. This makes it possible to determine the number of distinct RNA molecules in tissues or cells and to use these data to draw conclusions. The entirety of RNAs, in particular mRNAs (messenger RNAs) as potential precursors of proteins, provides a comprehensive insight into the functional state of the cells and tissues under investigation. In addition to cell cultures or unfixed tissue, formalin-fixed and paraffin-embedded (FFPE) tissue can also be analysed for this purpose using specific methods. In this overview, the methodological strategy and its application to the field of ophthalmic histopathology are presented.

摘要

“下一代测序”(NGS)的高通量方法能够经济高效地解码样本中数百万个RNA分子的核苷酸序列。这使得确定组织或细胞中不同RNA分子的数量并利用这些数据得出结论成为可能。所有RNA,特别是作为蛋白质潜在前体的mRNA(信使RNA),能全面洞察所研究细胞和组织的功能状态。除了细胞培养物或未固定组织外,还可使用特定方法对福尔马林固定石蜡包埋(FFPE)组织进行此项分析。在本综述中,将介绍该方法策略及其在眼科组织病理学领域的应用。

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