Suppr超能文献

与 的比较基因组学揭示了两个物种的特征。

Comparative Genomics of and Revealed Characteristic Features of Both Species.

机构信息

Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, 28 Jagiellonska Street, 40-032 Katowice, Poland.

出版信息

Int J Mol Sci. 2020 Jul 12;21(14):4922. doi: 10.3390/ijms21144922.

Abstract

Although strains are efficient biocontrol agents, their field applications have raised concerns due to their possible threat to human health. The non-pathogenic species, which is closely related to has been proposed as an alternative. However, knowledge regarding the genetics of is limited. Thus, the aim of the study was to define any genetic differences between the species and to characterise their ability to promote the growth of plant hosts as well as to enhance phytoremediation efficiency. We compared 37 strains that belong to both species using the tools of comparative genomics and identified 96 genetic features that are unique to (e.g., chitin-binding protein, mechanosensitive channels of small conductance and KGG repeat-containing stress-induced protein) and 59 that are unique to (e.g., glucosylglycerol-phosphate synthase, cold shock protein with the DUF1294 domain, and pteridine-dependent dioxygenase-like protein). The strains from both species have a high potential for biocontrol, which is mainly related to the production of keratinases (KerSMD and KerSMF), proteinases and chitinases. Plant growth promotion traits are attributed to the biosynthesis of siderophores, spermidine, osmoprotectants such as trehalose and glucosylglycerol, which is unique to . In eight out of 37 analysed strains, the genes that are required to degrade protocatechuate were present. While our results show genetic differences between the two species, they had a similar growth promotion potential. Considering the information above, constitutes a promising alternative for for use in agricultural biotechnology.

摘要

虽然 菌株是有效的生物防治剂,但由于它们可能对人类健康构成威胁,其田间应用引起了关注。与 密切相关的非致病性 物种已被提议作为替代品。然而,关于 的遗传学知识有限。因此,本研究的目的是定义这两个物种之间的任何遗传差异,并表征它们促进植物宿主生长和增强植物修复效率的能力。我们使用比较基因组学工具比较了属于这两个物种的 37 株菌株,并鉴定了 96 个 (例如几丁质结合蛋白、小电导机械敏感通道和 KGG 重复包含应激诱导蛋白)和 59 个 (例如葡萄糖基甘油磷酸合酶、具有 DUF1294 结构域的冷休克蛋白和蝶啶依赖性双氧酶样蛋白)特有的遗传特征。这两个物种的菌株都具有很高的生物防治潜力,这主要与角蛋白酶(KerSMD 和 KerSMF)、蛋白酶和几丁质酶的产生有关。植物生长促进特性归因于铁载体、亚精胺、海藻糖和葡萄糖基甘油等渗透物的生物合成,这是 的特征。在所分析的 37 株菌株中,有 8 株存在降解原儿茶酸所需的基因。虽然我们的研究结果表明这两个物种存在遗传差异,但它们具有相似的促生长潜力。考虑到上述信息, 构成了农业生物技术中替代 的有前途的选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f7e/7404187/7079c9e62599/ijms-21-04922-g0A1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验