Extreme Biology laboratory, Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Russia.
Division of Biotechnology, Institute of Agrobiological Sciences, National Institute of Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Sci Rep. 2020 Jul 15;10(1):11633. doi: 10.1038/s41598-020-68330-6.
Larvae of the sleeping chironomid Polypedilum vanderplanki are known for their extraordinary ability to survive complete desiccation in an ametabolic state called "anhydrobiosis". The unique feature of P. vanderplanki genome is the presence of expanded gene clusters associated with anhydrobiosis. While several such clusters represent orthologues of known genes, there is a distinct set of genes unique for P. vanderplanki. These include Lea-Island-Located (LIL) genes with no known orthologues except two of LEA genes of P. vanderplanki, PvLea1 and PvLea3. However, PvLIL proteins lack typical features of LEA such as the state of intrinsic disorder, hydrophilicity and characteristic LEA_4 motif. They possess four to five transmembrane domains each and we confirmed membrane targeting for three PvLILs. Conserved amino acids in PvLIL are located in transmembrane domains or nearby. PvLEA1 and PvLEA3 proteins are chimeras combining LEA-like parts and transmembrane domains, shared with PvLIL proteins. We have found that PvLil genes are highly upregulated during anhydrobiosis induction both in larvae of P. vanderplanki and P. vanderplanki-derived cultured cell line, Pv11. Thus, PvLil are a new intriguing group of genes that are likely to be associated with anhydrobiosis due to their common origin with some LEA genes and their induction during anhydrobiosis.
被称为“休眠”摇蚊幼虫的 Polypedilum vanderplanki 以其在无代谢状态下完全干燥而生存的非凡能力而闻名,这种无代谢状态被称为“脱水休眠”。P. vanderplanki 基因组的独特特征是存在与脱水休眠相关的扩展基因簇。虽然有几个这样的簇代表已知基因的同源物,但也有一组独特的基因是 P. vanderplanki 所特有的。这些基因包括与已知基因没有同源物的 Lea-Island-Located (LIL) 基因,除了 P. vanderplanki 的两个 LEA 基因 PvLea1 和 PvLea3 外。然而,PvLIL 蛋白缺乏 LEA 的典型特征,如内在无序状态、亲水性和特征性 LEA_4 基序。它们各自具有四个到五个跨膜结构域,我们证实了三个 PvLIL 的膜靶向。PvLIL 中的保守氨基酸位于跨膜结构域或附近。PvLEA1 和 PvLEA3 蛋白是嵌合体,结合了 LEA 样部分和与 PvLIL 蛋白共享的跨膜结构域。我们发现,在 P. vanderplanki 幼虫和源自 P. vanderplanki 的培养细胞系 Pv11 中,PvLil 基因在脱水休眠诱导过程中高度上调。因此,PvLil 是一组新的有趣基因,由于它们与一些 LEA 基因的共同起源以及在脱水休眠期间的诱导,它们可能与脱水休眠有关。