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观点:二十年后植物硝酸还原酶的同位素分馏

Viewpoint: Isotopic fractionation by plant nitrate reductase, twenty years later.

作者信息

Tcherkez Guillaume, Farquhar Graham D

机构信息

Laboratoire d'Ecophysiologie Végétale, Bâtiment 362, Université Paris XI, 91405 Orsay, France.

Environmental Biology Group, Research School of Biological Sciences, Australian National University, GPO Box 475, Canberra, ACT 2601, Australia.

出版信息

Funct Plant Biol. 2006 Jun;33(6):531-537. doi: 10.1071/FP05284.

Abstract

Plant nitrate reductase, the enzyme that reduces nitrate (NO) to nitrite (NO), is known to fractionate N isotopes, depleting nitrite in N compared with substrate nitrate. Nearly 20 years ago, the nitrogen isotope effect associated with this reaction was found to be around 1.015. However, the relationships between the isotope effect and the mechanism of the reaction have not yet been examined in the light of recent advances regarding the catalytic cycle and enzyme structure. We thus give here the mathematical bases of the N / N and also the O / O isotope effects as a function of reaction rates. Enzymatic nitrate reduction involves steps other than NO reduction itself, in which the oxidation number of N changes from +V (nitrate) to +III (nitrite). Using some approximations, we give numerical estimates of the intrinsic N and O isotope effects and this leads us to challenge the assumptions of nitrate reduction itself as being a rate-limiting step within the nitrate reductase reaction, and of the formation of a bridging oxygen as a reaction intermediate.

摘要

植物硝酸还原酶是一种将硝酸盐(NO₃⁻)还原为亚硝酸盐(NO₂⁻)的酶,已知其会分馏氮同位素,与底物硝酸盐相比,亚硝酸盐中的氮会减少。大约20年前,发现与该反应相关的氮同位素效应约为1.015。然而,鉴于近期在催化循环和酶结构方面的进展,尚未对同位素效应与反应机制之间的关系进行研究。因此,我们在此给出¹⁵N/¹⁴N以及¹⁸O/¹⁶O同位素效应作为反应速率函数的数学基础。酶促硝酸盐还原涉及除NO₃⁻还原本身之外的步骤,其中氮的氧化数从+V(硝酸盐)变为+III(亚硝酸盐)。通过一些近似计算,我们给出了内在氮和氧同位素效应的数值估计,这使我们对硝酸盐还原本身作为硝酸还原酶反应中的限速步骤以及桥连氧的形成作为反应中间体的假设提出质疑。

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