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用于基础研究和应用技术的二维晶体中光驱动质子泵细菌视紫红质的工程与生产

Engineering and Production of the Light-Driven Proton Pump Bacteriorhodopsin in 2D Crystals for Basic Research and Applied Technologies.

作者信息

Stauffer Mirko, Hirschi Stephan, Ucurum Zöhre, Harder Daniel, Schlesinger Ramona, Fotiadis Dimitrios

机构信息

Institute of Biochemistry and Molecular Medicine, and Swiss National Centre of Competence in Research (NCCR) TransCure, University of Bern, 3012 Bern, Switzerland.

Department of Physics, Genetic Biophysics, Freie Universität Berlin, 14195 Berlin, Germany.

出版信息

Methods Protoc. 2020 Jul 22;3(3):51. doi: 10.3390/mps3030051.

Abstract

The light-driven proton pump bacteriorhodopsin (BR) from the extreme halophilic archaeon is a retinal-binding protein, which forms highly ordered and thermally stable 2D crystals in native membranes (termed purple membranes). BR and purple membranes (PMs) have been and are still being intensively studied by numerous researchers from different scientific disciplines. Furthermore, PMs are being successfully used in new, emerging technologies such as bioelectronics and bionanotechnology. Most published studies used the wild-type form of BR, because of the intrinsic difficulty to produce genetically modified versions in purple membranes homologously. However, modification and engineering is crucial for studies in basic research and, in particular, to tailor BR for specific applications in applied sciences. We present an extensive and detailed protocol ranging from the genetic modification and cultivation of to the isolation, and biochemical, biophysical and functional characterization of BR and purple membranes. Pitfalls and problems of the homologous expression of BR versions in are discussed and possible solutions presented. The protocol is intended to facilitate the access to genetically modified BR versions for researchers of different scientific disciplines, thus increasing the application of this versatile biomaterial.

摘要

来自极端嗜盐古菌的光驱动质子泵细菌视紫红质(BR)是一种视网膜结合蛋白,它在天然膜(称为紫膜)中形成高度有序且热稳定的二维晶体。BR和紫膜(PMs)一直并仍在被来自不同科学学科的众多研究人员深入研究。此外,紫膜正成功应用于生物电子学和生物纳米技术等新兴技术中。由于在紫膜中同源生产转基因版本存在内在困难,大多数已发表的研究使用的是野生型BR。然而,修饰和工程改造对于基础研究至关重要,特别是为了使BR适用于应用科学中的特定应用。我们展示了一个广泛而详细的方案,涵盖从 的基因修饰和培养到BR和紫膜的分离、生化、生物物理及功能表征。讨论了 在BR版本同源表达中的陷阱和问题,并提出了可能的解决方案。该方案旨在为不同科学学科的研究人员获取转基因BR版本提供便利,从而增加这种多功能生物材料的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b29/7563565/a865c5f88354/mps-03-00051-g002.jpg

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