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新种,一种从温泉中分离出的自由生活阿米巴。

sp. nov., a Free-Living Amoeba Isolated from a Thermal Spring.

作者信息

Borquez-Román Manuel Alejandro, Lares-Jiménez Luis Fernando, Rodriguez-Anaya Libia Zulema, Gonzalez-Galaviz Jose Reyes, Fuerst Paul A, Ibarra-Gámez José Cuauhtémoc, Casillas-Hernández Ramón, Lares-Villa Fernando

机构信息

Programa de Doctorado en Ciencias en Biotecnología, Instituto Tecnológico de Sonora, Ciudad Obregón, Sonora 85000, Mexico.

Departamento de Ciencias Agronómicas y Veterinarias, Instituto Tecnológico de Sonora, Ciudad Obregón, Sonora 85000, Mexico.

出版信息

Pathogens. 2020 Jul 17;9(7):586. doi: 10.3390/pathogens9070586.

Abstract

Two amoeboid organisms were obtained from water samples taken from a thermal spring, "Agua Caliente", in Northwestern Mexico. The isolates were obtained when samples were cultivated at 37 °C on non-nutrient agar coated with The initial identification of the isolates was performed morphologically using light microscopy. The samples were found to have trophozoite morphology consistent with members of the genus , a genus derived in 2007 from within the abolished polyphyletic genus . Further analysis was performed by sequencing PCR products obtained using universal eukaryotic primers for the small subunit ribosomal ribonucleic acid (SSU rRNA) gene. Sequencing primers were designed to allow the comparison of the 18S rRNA gene sequences of the new isolates with previous sequences reported for Phylogenetic relationships among sequences from were determined using Maximum Likelihood analysis. The results showed the two "Agua Caliente" sequences to be closely related, while clearly separating them from those of other taxa. The degrees of sequence differentiation from other taxa were considered sufficient to allow us to propose that the Mexican isolates represent a new species.

摘要

从墨西哥西北部一处名为“Agua Caliente”的温泉水样中分离出两种阿米巴样生物。当样本在涂有[具体物质未给出]的非营养琼脂上于37°C培养时获得了这些分离株。最初通过光学显微镜对分离株进行形态学鉴定。发现这些样本具有与[属名未给出]属成员一致的滋养体形态,该属是2007年从已废除的多系属中衍生出来的。通过对使用通用真核引物扩增小亚基核糖体核糖核酸(SSU rRNA)基因得到的PCR产物进行测序来进一步分析。设计测序引物以便将新分离株的18S rRNA基因序列与先前报道的[属名未给出]序列进行比较。使用最大似然分析确定[属名未给出]序列之间的系统发育关系。结果表明两个“Agua Caliente样本序列密切相关,同时又明显与其他[属名未给出]分类群的序列区分开来。与其他分类群的序列分化程度被认为足以使我们提出墨西哥分离株代表一个新物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/36bf/7400236/c0fbcabe38e3/pathogens-09-00586-g001.jpg

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